Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31100
(706 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 4.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 6.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 8.6
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 553 IYLNNACIIYKYNHYIILHYFIKYLRPAPASL 458
I+ NN YN+Y L+Y I Y+ P +
Sbjct: 90 IHNNNNYNNNNYNNYKKLYYNINYIEQVPVPI 121
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 553 IYLNNACIIYKYNHYIILHYFIKY 482
++L+ A I + ++HYF KY
Sbjct: 280 VFLSFAFIFATIIQFAVVHYFTKY 303
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 24 NSISENNTVIDQRVNDVNVSVNTGYYKL 107
NS+S NN + N+ N + NT Y KL
Sbjct: 86 NSLS-NNYNYNNNYNNYNNNYNTNYKKL 112
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAP 467
Y Y NN YN+Y L+Y I Y+ P
Sbjct: 94 YNNYNNNN----NYNNYKKLYYNINYIEQIP 120
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAP 467
Y Y NN YN+Y L+Y I Y+ P
Sbjct: 94 YNNYNNNN----NYNNYKKLYYNINYIEQIP 120
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAP 467
Y Y NN YN+Y L+Y I Y+ P
Sbjct: 94 YNNYNNNN----NYNNYKKLYYNINYIEQIP 120
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAP 467
Y Y NN YN+Y L+Y I Y+ P
Sbjct: 94 YNNYNNNN----NYNNYKKLYYNINYIEQIP 120
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAP 467
Y Y NN YN+Y L+Y I Y+ P
Sbjct: 94 YNNYNNNN----NYNNYKKLYYNINYIEQIP 120
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAP 467
Y Y NN YN+Y L+Y I Y+ P
Sbjct: 94 YNNYNNNN----NYNNYKKLYYNINYIEQIP 120
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAP 467
Y Y NN YN+Y L+Y I Y+ P
Sbjct: 94 YNNYNNNN----NYNNYKKLYYNINYIEQIP 120
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAP 467
Y Y NN YN+Y L+Y I Y+ P
Sbjct: 94 YNNYNNNN----NYNNYKKLYYNINYIEQIP 120
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 520 YNHYIILHYFIKYLRPAP 467
YN+Y L+Y I Y+ P
Sbjct: 111 YNNYKKLYYNINYIEQIP 128
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3
Query: 42 NTVIDQRVNDVNVS 83
NT+ID R ND++++
Sbjct: 426 NTIIDYRNNDLSIN 439
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,071
Number of Sequences: 438
Number of extensions: 4031
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -