Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31098
         (846 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    27   0.72 
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   2.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   8.8  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 139 RTPRLQEIRKGYKRTTNRRPEQGPEANRRPSS 234
           RT RLQ +R  ++   +R PEQ     R+PS+
Sbjct: 71  RTSRLQSLRSSFRTDRDRDPEQ--PRQRKPST 100



 Score = 24.2 bits (50), Expect = 5.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 425  KLVDVTQAYWEYEDNELTVRFKYVNS 502
            K   +   YW Y+D  LT+   Y+ S
Sbjct: 939  KKTGIIDVYWLYDDGGLTLLLPYIIS 964


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 149 RGVLSTCPLCSRVYHHDGTCWASRDDIYGN 60
           RG   TC  C+   HH   C  +R + + N
Sbjct: 23  RGQAQTCRNCAAPVHHGLNCVQNRQNRFAN 52


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 302  TARNCRSRTFHECPRFHNRCTASEDGRRFASG 207
            T  NC+  T       H R T ++ GR+   G
Sbjct: 1273 TVSNCKYNTTQHHQTHHERRTTADFGRKATDG 1304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,399
Number of Sequences: 2352
Number of extensions: 19142
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)