Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31098
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    24   2.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   3.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   8.2  

>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 437 VTQAYWEYEDNELTVRFKYVNSDTNDGDLYK 529
           VT+ Y E+ DNEL V      SD     +YK
Sbjct: 104 VTRLY-EFSDNELLVHISTNKSDVKATRVYK 133


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 497 NSDTNDGDLYKC 532
           ++ TNDG LYKC
Sbjct: 460 STHTNDGGLYKC 471


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 53  HGRSHKCRHERPSKCRHGGKLGCKGGRWTERPGFKKY 163
           H R    RHE  +  R+ G+  C   R  E    ++Y
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRY 267


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 53  HGRSHKCRHERPSKCRHGGKLGCKGGRWTE 142
           H R    RHE  +  R+ G+  C   R  E
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDRSRE 260


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 53  HGRSHKCRHERPSKCRHGGKLGCKGGRWTE 142
           H R    RHE  +  R+ G+  C   R  E
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDRSRE 260


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 53  HGRSHKCRHERPSKCRHGGKLGCKGGRWTE 142
           H R    RHE  +  R+ G+  C   R  E
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDRSRE 260


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 53  HGRSHKCRHERPSKCRHGGKLGCKGGRWTE 142
           H R    RHE  +  R+ G+  C   R  E
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDRSRE 260


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 53  HGRSHKCRHERPSKCRHGGKLGCKGGRWTE 142
           H R    RHE  +  R+ G+  C   R  E
Sbjct: 231 HSRYEDLRHEDRNSYRNDGERSCSRDRSRE 260


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 53  HGRSHKCRHERPSKCRHGGKLGCKGGRWTE 142
           H R    RHE  +  R+ G+  C   R  E
Sbjct: 231 HSRYEDSRHEDGNSYRNDGERSCSRDRSRE 260


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 53  HGRSHKCRHERPSKCRHGGKLGCKGGRWTE 142
           H R    RHE  +  R+ G+  C   R  E
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDRSRE 260


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,561
Number of Sequences: 438
Number of extensions: 5265
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)