Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31098
(846 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g10680.1 68416.m01284 heat shock protein-related contains wea... 34 0.14
At4g38690.1 68417.m05479 1-phosphatidylinositol phosphodiesteras... 33 0.24
At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock pro... 31 0.73
At5g52780.1 68418.m06550 expressed protein similar to unknown pr... 30 2.2
At3g49110.1 68416.m05364 peroxidase 33 (PER33) (P33) (PRXCA) / n... 30 2.2
At1g65170.1 68414.m07389 ubiquitin carboxyl-terminal hydrolase f... 30 2.2
At5g48120.1 68418.m05944 expressed protein low similarity to MMS... 29 3.9
At3g49120.1 68416.m05366 peroxidase, putative identical to perox... 29 3.9
At3g32980.1 68416.m04183 peroxidase 32 (PER32) (P32) (PRXR3) ide... 28 6.8
At1g44110.1 68414.m05095 cyclin, putative similar to mitotic cyc... 28 6.8
At1g26520.1 68414.m03232 cobalamin synthesis/P47K family protein... 28 6.8
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 28 9.0
>At3g10680.1 68416.m01284 heat shock protein-related contains weak
similarity to Pfam profile PF00011: Hsp20/alpha
crystallin family
Length = 490
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +2
Query: 290 SYALFIPLPGVTADDIIVKS--KYRYVYITARRPLPLKP---YTEIKRLPKLVDVTQAYW 454
S L++ LPG D I +K + R V I +RPL + ++E R+P D+T+
Sbjct: 38 SIFLYVNLPGFYRDQIEIKKDERTRTVQIQGQRPLSAQTKARFSEAYRVPDTCDMTKLST 97
Query: 455 EYEDNELTVRF 487
+ LT+ F
Sbjct: 98 SFSHGLLTIEF 108
>At4g38690.1 68417.m05479 1-phosphatidylinositol
phosphodiesterase-related contains weak similarity to
1-phosphatidylinositol phosphodiesterase precursor (EC
4.6.1.13) (Phosphatidylinositol diacylglycerol-lyase)
(Phosphatidylinositol- specific phospholipase C)
(PI-PLC). (Swiss-Prot:P34024) [Listeria monocytogenes]
Length = 318
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 515 GD-LYKCGFDYKDSWITVPESDDKYEPDIDVRFALQNAEVNNKINDYLKNTTTPQPD 682
GD L+ G+ KD+WI K+E +I + Q + K ++NT TPQPD
Sbjct: 203 GDPLWSAGY-LKDNWIDTDLPSTKFESNIK-HLSQQQPATSRKFFYRVENTVTPQPD 257
>At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock
protein (HSP26.5-P) contains Pfam profile: PF00011
Hsp20/alpha crystallin family: identified in Scharf,
K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 134
Score = 31.5 bits (68), Expect = 0.73
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +2
Query: 245 NDYENAGTREMFGTYSYALFIPLPGVTADDIIVKSKYR-YVYI-TARRPL-----PLKPY 403
N+Y+ R S+ + LPG+ ++I V+ + Y+ I T P+ PLK +
Sbjct: 21 NNYQENHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTF 80
Query: 404 TEIKRLPKLVDVTQAYWEYEDNELTV 481
RLP+ +D+ YED LTV
Sbjct: 81 KRKFRLPESIDMIGISAGYEDGVLTV 106
>At5g52780.1 68418.m06550 expressed protein similar to unknown
protein (pir||T04431)
Length = 168
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 322 NSRERYEQRVTVGPEHFTSARVFIIVAQPPKTVVDSLQVPAQVFD 188
N++ R+E ++ GP+ F S+R +P D +P +VF+
Sbjct: 34 NNKPRWESKLHAGPKGFQSSRTSEKPGRPDPDPEDDPPIPQEVFE 78
>At3g49110.1 68416.m05364 peroxidase 33 (PER33) (P33) (PRXCA) /
neutral peroxidase C (PERC) identical to SP|P24101
Peroxidase 33 precursor (EC 1.11.1.7) (Atperox P33)
(ATPCa) (Neutral peroxidase C) (PERC) {Arabidopsis
thaliana}
Length = 354
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 709 GSSENRRLLKYLYNISHWGLYDPVLSTGY 795
G ++ R ++ LYN S+ GL DP L+T Y
Sbjct: 204 GKNQCRFIMDRLYNFSNTGLPDPTLNTTY 232
>At1g65170.1 68414.m07389 ubiquitin carboxyl-terminal hydrolase
family protein contains Pfam profile PF00443: Ubiquitin
carboxyl-terminal hydrolase
Length = 259
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 431 VDVTQAYWEYEDNELTVRFKYVNSDTNDGDLYKCGFDYKDS-WITVPESDDKYEPDID 601
+DV+ Y +YE + +++ V+ +DGD Y C Y+D+ W+ S K D D
Sbjct: 160 IDVSVIY-QYEGDSAFTKYRLVSMVCSDGDRYNC-VAYEDNRWVRHVGSQKKVIGDWD 215
>At5g48120.1 68418.m05944 expressed protein low similarity to MMS19
[Mus musculus] GI:14029390
Length = 1152
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 687 SRSGCGVVVFFK*SLILLFTSAFCSAN 607
+ SGC +V F LI +FTSA C +N
Sbjct: 482 ANSGCSMVKSFSVPLIQVFTSAVCRSN 508
>At3g49120.1 68416.m05366 peroxidase, putative identical to
peroxidase [Arabidopsis thaliana] gi|405611|emb|CAA50677
Length = 353
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 709 GSSENRRLLKYLYNISHWGLYDPVLSTGY 795
G ++ + +L LYN S+ GL DP L+T Y
Sbjct: 203 GKNQCQFILDRLYNFSNTGLPDPTLNTTY 231
>At3g32980.1 68416.m04183 peroxidase 32 (PER32) (P32) (PRXR3)
identical to SP|Q9LHB9 Peroxidase 32 precursor (EC
1.11.1.7) (Atperox P32) (PRXR3) (ATP16a) {Arabidopsis
thaliana}
Length = 352
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 709 GSSENRRLLKYLYNISHWGLYDPVLSTGY 795
G ++ + ++ LYN S+ GL DP L+T Y
Sbjct: 202 GKNQCQFIMDRLYNFSNTGLPDPTLNTTY 230
>At1g44110.1 68414.m05095 cyclin, putative similar to mitotic cyclin
a2-type [Glycine max] GI:857397, cyclin A-like protein
[Nicotiana tabacum] GI:1064927; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 460
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 494 VNSDTNDGDLYKCGFDYKDSWITVPESDDKYEPDIDVRFALQNAEVNNKINDYL 655
VN D+N+GD C D + + S+ K PD+D +Q +VN+ + L
Sbjct: 179 VNIDSNNGDPQLCATFACDIYKHLRASEAKKRPDVDYMERVQK-DVNSSMRGIL 231
>At1g26520.1 68414.m03232 cobalamin synthesis/P47K family protein
similar to dopamine-responsive protein [Homo sapiens]
GI:13177623; contains Pfam profile PF02492: Cobalamin
synthesis protein/P47K
Length = 301
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 683 GQVVV*WYFSNNH*FCCSLQHSVVQTLHQ 597
G +V W N CC+++HS+VQ L Q
Sbjct: 95 GAIVEEWVELANGCVCCTVKHSLVQALEQ 123
>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
hsp20 family protein contains Pfam profile: PF00011
Hsp20/alpha crystallin family
Length = 285
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 284 TYSYALFIPLPGVTADDIIVKSKYRYVYITARR 382
T+SY + I LPG + +DI V+ + +T RR
Sbjct: 194 THSYVVAIELPGASINDIRVEVDNTNLTVTGRR 226
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,457,744
Number of Sequences: 28952
Number of extensions: 369188
Number of successful extensions: 957
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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