Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31095
(340 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0152 - 1168928-1169377 133 3e-32
11_01_0155 - 1287003-1287452 133 3e-32
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539... 38 0.002
03_06_0097 - 31632238-31632525,31633386-31633769 38 0.002
07_03_0227 - 15398371-15398925 30 0.40
12_01_0730 + 6505759-6508806 28 2.1
12_01_0714 + 6223269-6226250 28 2.1
11_01_0523 - 4109070-4109984,4110532-4110936 28 2.1
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 28 2.1
04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986... 28 2.1
01_05_0500 + 22752190-22752329,22752957-22753032,22753292-227533... 27 2.8
11_04_0467 + 18039458-18039638,18040136-18040227,18040336-180404... 27 5.0
06_03_0062 + 16116893-16117029,16117472-16117760 27 5.0
01_06_0683 - 31173763-31174635,31175146-31175436 27 5.0
08_01_0230 + 1837700-1837871,1838035-1838195,1838329-1838476,183... 26 6.6
06_02_0131 + 12161268-12161781,12162123-12162867,12162950-121629... 26 6.6
03_02_0334 + 7570568-7570709,7571622-7571844,7572178-7572257,757... 26 6.6
02_05_0056 + 25461423-25461708,25461986-25462026,25466047-254660... 26 6.6
01_06_0990 - 33623085-33623615,33624138-33624278 26 6.6
12_01_0954 - 9496370-9496643,9497181-9497239,9497574-9498179 26 8.7
10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657... 26 8.7
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 26 8.7
09_02_0168 - 5253588-5254688 26 8.7
08_02_1449 - 27174451-27178005 26 8.7
08_01_0379 + 3371125-3371988 26 8.7
08_01_0234 + 1914155-1914326,1914474-1914634,1914757-1914904,191... 26 8.7
07_01_0008 - 56178-57095 26 8.7
05_04_0061 + 17582368-17582606,17582716-17583090,17593677-17594265 26 8.7
01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309 26 8.7
>12_01_0152 - 1168928-1169377
Length = 149
Score = 133 bits (322), Expect = 3e-32
Identities = 58/99 (58%), Positives = 78/99 (78%)
Frame = +1
Query: 43 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 222
R P VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K EPILL G+ +F
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66
Query: 223 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
+D+R+ V+GGG +Q+YAIRQAI+KAL+A+YQKYVDE
Sbjct: 67 KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDE 105
>11_01_0155 - 1287003-1287452
Length = 149
Score = 133 bits (322), Expect = 3e-32
Identities = 58/99 (58%), Positives = 78/99 (78%)
Frame = +1
Query: 43 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 222
R P VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K EPILL G+ +F
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66
Query: 223 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
+D+R+ V+GGG +Q+YAIRQAI+KAL+A+YQKYVDE
Sbjct: 67 KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDE 105
>07_03_1553 -
27653473-27653490,27653634-27653673,27653852-27653939,
27654150-27654230,27654644-27655084,27655692-27656325
Length = 433
Score = 38.3 bits (85), Expect = 0.002
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = +1
Query: 73 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 252
G++K + A + + G G VN + D P +L ++ + D+ TVK
Sbjct: 295 GKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVK 353
Query: 253 GGGHVAQVYAIRQAISKAL 309
GGG QV AIR IS+AL
Sbjct: 354 GGGVSGQVGAIRLGISRAL 372
>03_06_0097 - 31632238-31632525,31633386-31633769
Length = 223
Score = 37.9 bits (84), Expect = 0.002
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 55 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 225
Q + GR+KTA A + G G + +N R P ++Y + P++ LG E +
Sbjct: 96 QRITATGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEY-CKVPLVTLGFE--N 152
Query: 226 MVDIRVTVKGGGHVAQVYAIRQAISKALI 312
D+ V V GGG Q AI +++AL+
Sbjct: 153 SYDVFVKVHGGGLSGQAQAICLGVARALV 181
>07_03_0227 - 15398371-15398925
Length = 184
Score = 30.3 bits (65), Expect = 0.40
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 193 VPEVCTAAVWAQPSPMGARLHAAFH--DHACNTQLRWRF 83
+P +C A W P+ A H FH C+ + RW +
Sbjct: 23 LPPLCRAPWWPSPASSAAATHLRFHPRHRRCHPRRRWSY 61
>12_01_0730 + 6505759-6508806
Length = 1015
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 120 MTTLAIRNCGGGFLTSEYLDGLDGLTSCLLHSSHFA 13
+TTLA+ NC + L L + LLHS++FA
Sbjct: 436 LTTLALYNCNFSGTVPPQILNLTRLQTLLLHSNNFA 471
>12_01_0714 + 6223269-6226250
Length = 993
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 120 MTTLAIRNCGGGFLTSEYLDGLDGLTSCLLHSSHFA 13
+TTLA+ NC + L L + LLHS++FA
Sbjct: 414 LTTLALYNCNFSGTVHPQILNLTRLQTLLLHSNNFA 449
>11_01_0523 - 4109070-4109984,4110532-4110936
Length = 439
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 253 GGGHVAQVYAIRQAISKALIAFY 321
GGG V +++A++KAL+AFY
Sbjct: 48 GGGGFFDVGRLKEALAKALVAFY 70
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 35 RQDVSPSRPSKYSDVRKPPPQLRIAS 112
R+ S S P K SD R PPP+ R S
Sbjct: 33 RRSTSRSPPPKKSDSRSPPPRRRSTS 58
>04_04_1154 -
31297628-31298020,31298150-31298300,31298389-31298620,
31298700-31298910,31299137-31299255,31299341-31299415,
31299991-31300189,31300258-31300664,31300775-31300839,
31300967-31301011,31301449-31301520,31301597-31301671,
31301912-31301983,31302178-31302249,31302525-31302596,
31302880-31302951,31303056-31303127,31304064-31304135,
31304375-31304561,31304686-31304815
Length = 930
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 136 NGRPLDLVEPRLLQYKLQEPILLL 207
NG PLD V+P+L ++ +E I ++
Sbjct: 807 NGHPLDFVDPKLSEFNSEEVIRVI 830
>01_05_0500 +
22752190-22752329,22752957-22753032,22753292-22753351,
22754718-22754882,22756299-22756358
Length = 166
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 147 WAPVYTQHSMTTLAIRNCGGGFLTSEYLD 61
W V T H +T +A R+C G F ++LD
Sbjct: 18 WNYVVTAHKLTVVA-RSCVGNFTAPDHLD 45
>11_04_0467 +
18039458-18039638,18040136-18040227,18040336-18040452,
18041228-18041313,18041385-18041643,18041761-18041957,
18042181-18042213,18043371-18043862,18044236-18044299,
18045478-18045618,18045726-18045803,18047077-18047166,
18047260-18047352,18047430-18047489,18047567-18047635,
18047737-18047823,18048337-18048379,18048517-18048587,
18049050-18049143,18050335-18050447,18050909-18050998,
18051075-18051155,18052211-18052291,18052369-18052464,
18052543-18052599,18052693-18052737,18052807-18052872,
18052961-18052999
Length = 1004
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 208 GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIA 315
GK+ + R++V GGG+ Q+ A IS+A ++
Sbjct: 118 GKQSNELGHARISVTGGGYFHQLLAEHTIISEAFLS 153
>06_03_0062 + 16116893-16117029,16117472-16117760
Length = 141
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 148 MGARLHAAFHDHA--CNTQLRWRFSYVRILGRPGW 50
+ ARL A +HA N + RWR LG+ GW
Sbjct: 26 LDARLWAVESEHARVVNPEQRWRARSTGWLGKKGW 60
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 50 PSRPSKYSDVRKPPPQLRIASV 115
PS+P+K D PP Q +++SV
Sbjct: 224 PSKPAKKKDAPAPPAQAQLSSV 245
>08_01_0230 +
1837700-1837871,1838035-1838195,1838329-1838476,
1838802-1839002,1839301-1839416,1839463-1839501
Length = 278
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 5 RHEAKWLLCRRQDVSPSRPSKYSDVRKPPPQLRIASV 115
R +A + LC+R SPS + S PPP I ++
Sbjct: 17 RVQALYELCKRTFPSPSSVAASSSPSSPPPDHAIGAI 53
>06_02_0131 +
12161268-12161781,12162123-12162867,12162950-12162986,
12163083-12163216,12163298-12163625
Length = 585
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -2
Query: 246 CHSDV--NHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLA 106
CH + + E+F A + R + F+ +SGL Q P +H M+T A
Sbjct: 365 CHQVILASRSEYFKA-RLSRNMDFLEVKSGLQSTQSLPFLEEHDMSTEA 412
>03_02_0334 +
7570568-7570709,7571622-7571844,7572178-7572257,
7572869-7572929,7573670-7573796
Length = 210
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 157 PSPMGARLHAAFHDHACNTQLRWRFSYVRILGR 59
PSP A+ AA A N LRWR +L R
Sbjct: 7 PSPPPAQASAAEASGASNASLRWRILRRALLAR 39
>02_05_0056 +
25461423-25461708,25461986-25462026,25466047-25466083,
25466451-25466594,25466882-25466974,25467067-25467155,
25467241-25467537,25467629-25467765,25467860-25467952,
25468061-25468166,25468243-25468395
Length = 491
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 241 VTVKGGGHVAQVYAIRQAIS 300
VT++G GH ++A RQA+S
Sbjct: 455 VTIRGAGHEVPLHAPRQALS 474
>01_06_0990 - 33623085-33623615,33624138-33624278
Length = 223
Score = 26.2 bits (55), Expect = 6.6
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +1
Query: 85 TATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGH 264
T AV++ G L +G PR + + I + ++ +VD R GGGH
Sbjct: 116 TQHAVSWADDGEWELPESGEE-GTAPPRSGAHMTEVTIRITKRQLQELVDKRAAAAGGGH 174
Query: 265 VAQVYAIRQAISKALIA 315
VY + + L+A
Sbjct: 175 GYHVYRKSRRSAAELLA 191
>12_01_0954 - 9496370-9496643,9497181-9497239,9497574-9498179
Length = 312
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 73 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 207
G A A CK ML+ P DL++ ++ + +P++L+
Sbjct: 145 GSWDAAAASEVCKAADVMLKEVAAPADLIKEGAVEDEADQPLILI 189
>10_07_0132 +
13263577-13263732,13265391-13265456,13265607-13265705,
13267020-13267084,13267210-13267294,13267389-13267422,
13267539-13267642,13268085-13268408,13269090-13269605
Length = 482
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 KPPPQLRIASVVMECCV*TGAHWTW-LSPDCCSTNFRNLSFCSARKNSLWL 232
K PPQ+ ++ + + C V G + W L + + L A + +WL
Sbjct: 16 KAPPQISLSGLFLACMVAGGVQYGWALQLSLLTPYVQTLGIPHALTSVMWL 66
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 244 TVKGGGHVAQVYAIRQAIS 300
TVKGGGH A Y +Q ++
Sbjct: 403 TVKGGGHTAPEYMPKQCLA 421
>09_02_0168 - 5253588-5254688
Length = 366
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 54 PGRPSIRT*ENRHRSCVLQAW 116
P P+++T NR R CV Q W
Sbjct: 105 PMDPALKTDANRVRGCVSQVW 125
>08_02_1449 - 27174451-27178005
Length = 1184
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 189 LKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGGGFLTSEYLDGLDGLTSCLLHSSHFAS 10
L +V S +Q P+ + S+ TLA+ + G L E + L S S ++S
Sbjct: 919 LNYVGDWSVSKDLQVIPIRSWPSLVTLALASLGNSLLPDEQQTTMPPLESIQKLSIWYSS 978
Query: 9 C 7
C
Sbjct: 979 C 979
>08_01_0379 + 3371125-3371988
Length = 287
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 49 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEP 165
P A +FGR +TA V+Y GHG LD V P
Sbjct: 185 PAAAWPLFGRVQTAAPVSY-GGGHGSAAAATMFLDTVAP 222
>08_01_0234 +
1914155-1914326,1914474-1914634,1914757-1914904,
1915221-1915357
Length = 205
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 5 RHEAKWLLCRRQDVSPSRPSKYSDVRKPPPQLRIASV 115
R +A + LC+R SPS + S PPP I ++
Sbjct: 17 RVQALYELCKRTFPSPSSVAASSSPSSPPPDHAIRAI 53
>07_01_0008 - 56178-57095
Length = 305
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 178 TAAVWAQPSPMGARLHAAFHDHACNTQLRWRFS 80
TAA PS ARLH+ H +A + L+ R S
Sbjct: 119 TAASHLAPSSAPARLHSWIHYNATSATLQLRLS 151
>05_04_0061 + 17582368-17582606,17582716-17583090,17593677-17594265
Length = 400
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 255 WWSCSTSLRYQTSYFKGS 308
WW CS+S ++SY+ S
Sbjct: 49 WWPCSSSSTARSSYYSSS 66
>01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309
Length = 330
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -2
Query: 240 SDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGGGFLTSEYLD 61
+D + E + E +FL+ Q + + +W +YT +S++ LA+ N L LD
Sbjct: 210 NDDHLSEELINEMVMKFLEQTKQDNWSSGNEWPQMYTDYSISKLAV-NAYTRLLARRLLD 268
Query: 60 GLDG 49
+G
Sbjct: 269 RPEG 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,935,791
Number of Sequences: 37544
Number of extensions: 234267
Number of successful extensions: 721
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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