Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31095
(340 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 171 4e-43
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 171 4e-43
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 171 4e-43
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 171 4e-43
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 136 1e-32
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 101 4e-22
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 47 1e-05
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 47 1e-05
Z94801-1|CAB08162.2| 1376|Homo sapiens Menkes Disease (ATP7A) pr... 34 0.13
X82336-1|CAB94714.1| 1500|Homo sapiens Menkes disease protein. 34 0.13
X69208-1|CAA49145.1| 626|Homo sapiens heavy metal binding prot... 34 0.13
U27381-1|AAA96010.1| 1447|Homo sapiens protein ( Human Menkes di... 34 0.13
L06133-1|AAA35580.1| 1500|Homo sapiens Cu++-transporting P-type ... 34 0.13
AL645821-1|CAI42806.1| 1500|Homo sapiens ATPase, Cu++ transporti... 34 0.13
AB208828-1|BAD92065.1| 682|Homo sapiens ATPase, Cu++ transporti... 34 0.13
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 31 0.91
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 31 0.91
AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein pr... 29 4.8
AF202637-1|AAG22491.1| 155|Homo sapiens PP3111 protein. 28 6.4
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 171 bits (417), Expect = 4e-43
Identities = 76/97 (78%), Positives = 93/97 (95%)
Frame = +1
Query: 49 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 228
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 229 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDE
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDE 102
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 171 bits (417), Expect = 4e-43
Identities = 76/97 (78%), Positives = 93/97 (95%)
Frame = +1
Query: 49 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 228
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 229 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDE
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDE 102
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 171 bits (417), Expect = 4e-43
Identities = 76/97 (78%), Positives = 93/97 (95%)
Frame = +1
Query: 49 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 228
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 229 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDE
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDE 102
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 171 bits (417), Expect = 4e-43
Identities = 76/97 (78%), Positives = 93/97 (95%)
Frame = +1
Query: 49 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 228
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 229 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDE
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDE 102
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 136 bits (330), Expect = 1e-32
Identities = 60/83 (72%), Positives = 75/83 (90%)
Frame = +1
Query: 49 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 228
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 229 VDIRVTVKGGGHVAQVYAIRQAI 297
VDIRV VKGGGHVAQ+Y Q +
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQEL 88
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 101 bits (243), Expect = 4e-22
Identities = 50/96 (52%), Positives = 66/96 (68%)
Frame = +1
Query: 52 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 231
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 232 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDE
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDE 113
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 73 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 249
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 250 KGGGHVAQVYAIRQAISKALIAF 318
GGG AQ AIR A++KAL +F
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSF 355
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 73 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 249
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 250 KGGGHVAQVYAIRQAISKALIAF 318
GGG AQ AIR A++KAL +F
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSF 261
>Z94801-1|CAB08162.2| 1376|Homo sapiens Menkes Disease (ATP7A)
protein.
Length = 1376
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 270 CYMTTT-LDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNC 94
CY+ T + C S V + E L ++ + V +G +V++ P Q M IR
Sbjct: 490 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIREL 549
Query: 93 GGGFLTSEYLDGLDGLTSCLLHSSHFASC 7
G G E D DG+ ++ ASC
Sbjct: 550 GFGATVIENADEGDGVLELVVRGMTCASC 578
>X82336-1|CAB94714.1| 1500|Homo sapiens Menkes disease protein.
Length = 1500
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 270 CYMTTT-LDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNC 94
CY+ T + C S V + E L ++ + V +G +V++ P Q M IR
Sbjct: 490 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIREL 549
Query: 93 GGGFLTSEYLDGLDGLTSCLLHSSHFASC 7
G G E D DG+ ++ ASC
Sbjct: 550 GFGATVIENADEGDGVLELVVRGMTCASC 578
>X69208-1|CAA49145.1| 626|Homo sapiens heavy metal binding protein
protein.
Length = 626
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 270 CYMTTT-LDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNC 94
CY+ T + C S V + E L ++ + V +G +V++ P Q M IR
Sbjct: 490 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIREL 549
Query: 93 GGGFLTSEYLDGLDGLTSCLLHSSHFASC 7
G G E D DG+ ++ ASC
Sbjct: 550 GFGATVIENADEGDGVLELVVRGMTCASC 578
>U27381-1|AAA96010.1| 1447|Homo sapiens protein ( Human Menkes
disease gene (ATP7A), partial exon 23, partial cds. ).
Length = 1447
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 270 CYMTTT-LDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNC 94
CY+ T + C S V + E L ++ + V +G +V++ P Q M IR
Sbjct: 490 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIREL 549
Query: 93 GGGFLTSEYLDGLDGLTSCLLHSSHFASC 7
G G E D DG+ ++ ASC
Sbjct: 550 GFGATVIENADEGDGVLELVVRGMTCASC 578
>L06133-1|AAA35580.1| 1500|Homo sapiens Cu++-transporting P-type
ATPase protein.
Length = 1500
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 270 CYMTTT-LDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNC 94
CY+ T + C S V + E L ++ + V +G +V++ P Q M IR
Sbjct: 490 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIREL 549
Query: 93 GGGFLTSEYLDGLDGLTSCLLHSSHFASC 7
G G E D DG+ ++ ASC
Sbjct: 550 GFGATVIENADEGDGVLELVVRGMTCASC 578
>AL645821-1|CAI42806.1| 1500|Homo sapiens ATPase, Cu++ transporting,
alpha polypeptide (Menkes syndrome) protein.
Length = 1500
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 270 CYMTTT-LDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNC 94
CY+ T + C S V + E L ++ + V +G +V++ P Q M IR
Sbjct: 490 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIREL 549
Query: 93 GGGFLTSEYLDGLDGLTSCLLHSSHFASC 7
G G E D DG+ ++ ASC
Sbjct: 550 GFGATVIENADEGDGVLELVVRGMTCASC 578
>AB208828-1|BAD92065.1| 682|Homo sapiens ATPase, Cu++ transporting,
alpha polypeptide variant protein.
Length = 682
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 270 CYMTTT-LDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNC 94
CY+ T + C S V + E L ++ + V +G +V++ P Q M IR
Sbjct: 500 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIREL 559
Query: 93 GGGFLTSEYLDGLDGLTSCLLHSSHFASC 7
G G E D DG+ ++ ASC
Sbjct: 560 GFGATVIENADEGDGVLELVVRGMTCASC 588
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 160 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 336
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 160 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 336
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein
protein.
Length = 198
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +2
Query: 176 STNF-RNLSFCSARKNSLW 229
S+NF +N+SFC R++SLW
Sbjct: 49 SSNFEKNMSFCQIRRDSLW 67
>AF202637-1|AAG22491.1| 155|Homo sapiens PP3111 protein.
Length = 155
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 131 RSIP*PRLQYATAVAVFLRPNTWTAWMGSR 42
RS P RLQ A FL+PN + W G R
Sbjct: 25 RSEPPKRLQTAQVTDCFLKPNWRSLWPGKR 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,048,906
Number of Sequences: 237096
Number of extensions: 1309208
Number of successful extensions: 3285
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3283
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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