Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31095
(340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 154 1e-38
AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4 ... 30 0.37
AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin pro... 30 0.37
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 2.0
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 28 2.0
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 28 2.0
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 2.0
AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical... 28 2.0
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 27 4.5
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 27 4.5
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 27 4.5
AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 27 4.5
U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily ass... 26 6.0
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 26 6.0
AC006769-14|AAF60579.1| 378|Caenorhabditis elegans Hypothetical... 26 6.0
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 26 6.0
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 26 6.0
Z35598-3|CAA84655.3| 525|Caenorhabditis elegans Hypothetical pr... 26 7.9
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 26 7.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 26 7.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 26 7.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 26 7.9
AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical ... 26 7.9
AF024503-2|AAG24099.1| 331|Caenorhabditis elegans Serpentine re... 26 7.9
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 154 bits (374), Expect = 1e-38
Identities = 65/96 (67%), Positives = 87/96 (90%)
Frame = +1
Query: 52 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 231
+Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F V
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64
Query: 232 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
DIR+ V GGGHVAQ+YA+RQA++KAL+A+Y KYVDE
Sbjct: 65 DIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDE 100
>AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4
protein.
Length = 348
Score = 30.3 bits (65), Expect = 0.37
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -2
Query: 267 YMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGG 88
YMTT+ + NHR + L E ++ L + S + + AP Q T A G
Sbjct: 148 YMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELMG 207
Query: 87 G 85
G
Sbjct: 208 G 208
>AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin
protein 4 protein.
Length = 348
Score = 30.3 bits (65), Expect = 0.37
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -2
Query: 267 YMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGG 88
YMTT+ + NHR + L E ++ L + S + + AP Q T A G
Sbjct: 148 YMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELMG 207
Query: 87 G 85
G
Sbjct: 208 G 208
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -2
Query: 261 TTTLDCHSDVNHREFFLAEQKD-RF--LKFVLQQSG 163
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 181
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 201 FARQGKILYG*HQSDSQGWWSCSTSLRYQTSYFKGSDRLL 320
FAR +Y + WW+ S Y ++ KG+D LL
Sbjct: 399 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALL 438
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 201 FARQGKILYG*HQSDSQGWWSCSTSLRYQTSYFKGSDRLL 320
FAR +Y + WW+ S Y ++ KG+D LL
Sbjct: 662 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALL 701
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -2
Query: 261 TTTLDCHSDVNHREFFLAEQKD-RF--LKFVLQQSG 163
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 21 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 56
>AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical
protein Y37A1B.9 protein.
Length = 520
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 207 RQGKILYG*HQSDSQ---GWWSCSTSLRYQTSYFKGSDRLLPEIC 332
R+ +I+ H + GW S L Y+T+Y + L P+ C
Sbjct: 259 RENEIIINIHDNPEMTRLGWTSLEYKLGYRTTYIMNLENLHPDFC 303
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical protein
F16D3.4 protein.
Length = 1232
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 124 MLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGG 261
++ + P+D + R + ++L+ P+L LG E + + + + V GG
Sbjct: 1004 LMNIYSEPMDFISDRTV-FQLK-PLLDLGSEYYEQLILGIVVSAGG 1047
>Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical
protein ZK637.7b protein.
Length = 644
Score = 26.6 bits (56), Expect = 4.5
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +1
Query: 55 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVD 234
+AV+ ++ V +C +G + V+ L L++ L LQ + +G +K S VD
Sbjct: 538 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 592
Query: 235 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 336
++ G +++ IR AI +AF+Q YV+
Sbjct: 593 LQSL---GDAISE---IRTAIHPRNVAFFQDYVE 620
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 26.6 bits (56), Expect = 4.5
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +1
Query: 55 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVD 234
+AV+ ++ V +C +G + V+ L L++ L LQ + +G +K S VD
Sbjct: 536 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 590
Query: 235 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 336
++ G +++ IR AI +AF+Q YV+
Sbjct: 591 LQSL---GDAISE---IRTAIHPRNVAFFQDYVE 618
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 26.6 bits (56), Expect = 4.5
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +1
Query: 55 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVD 234
+AV+ ++ V +C +G + V+ L L++ L LQ + +G +K S VD
Sbjct: 536 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 590
Query: 235 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 336
++ G +++ IR AI +AF+Q YV+
Sbjct: 591 LQSL---GDAISE---IRTAIHPRNVAFFQDYVE 618
>AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein.
Length = 644
Score = 26.6 bits (56), Expect = 4.5
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +1
Query: 55 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVD 234
+AV+ ++ V +C +G + V+ L L++ L LQ + +G +K S VD
Sbjct: 538 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 592
Query: 235 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 336
++ G +++ IR AI +AF+Q YV+
Sbjct: 593 LQSL---GDAISE---IRTAIHPRNVAFFQDYVE 620
>U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform c protein.
Length = 860
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 136 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 225
NGRPLDL R + + + L EKFS
Sbjct: 584 NGRPLDLYSERYMSISPEAVVRLELNEKFS 613
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily assigned
gene nameprotein 152, isoform a protein.
Length = 2560
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 136 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 225
NGRPLDL R + + + L EKFS
Sbjct: 2255 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2284
>AC006769-14|AAF60579.1| 378|Caenorhabditis elegans Hypothetical
protein Y45G12C.1 protein.
Length = 378
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 149 WTWLSPDCCSTNFRNLSFCSARKNSLWLTSE*QSRVVVM*HKFTLSD 289
WT S D C N +N + R N WL++ ++V + H+ +L D
Sbjct: 74 WTGKSYDFCYRNPKNATLVGKRFNCTWLSTLEDLKLVGL-HEQSLVD 119
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 136 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 225
NGRPLDL R + + + L EKFS
Sbjct: 2197 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2226
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 136 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 225
NGRPLDL R + + + L EKFS
Sbjct: 2379 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2408
>Z35598-3|CAA84655.3| 525|Caenorhabditis elegans Hypothetical
protein F10F2.5 protein.
Length = 525
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 162 LNQVQWAPVYTQHSMTTLAIRNCGGGFLTSEYLDGLDGLTSC 37
++ ++AP+Y + + L+ C GF+ EY +G T C
Sbjct: 345 MSDARYAPIYCEQIVKGLSYTKCPDGFV--EYYRKNEGKTWC 384
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical protein
F28B4.3 protein.
Length = 2229
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 235 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 339
I++TV G G QVY +++AL FY Y +
Sbjct: 1138 IQLTVFGYGTTIQVYNGNGVLAEALELFYDDYTGQ 1172
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 139 GRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 243
G P +++E L Y +E G+E+ + D++V
Sbjct: 9008 GAPSEIIEVNTLDYDQEESFDFAGEEELKLDDVQV 9042
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 139 GRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 243
G P +++E L Y +E G+E+ + D++V
Sbjct: 9028 GAPSEIIEVNTLDYDQEESFDFAGEEELKLDDVQV 9062
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 139 GRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 243
G P +++E L Y +E G+E+ + D++V
Sbjct: 9028 GAPSEIIEVNTLDYDQEESFDFAGEEELKLDDVQV 9062
>AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical
protein F15E6.9 protein.
Length = 664
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/47 (21%), Positives = 29/47 (61%)
Frame = +1
Query: 172 LQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALI 312
+Q+K ++ +++ KEK S +++R ++ +V ++ + Q + + L+
Sbjct: 296 IQWKYRDAVIVQAKEKMSAIELRRAIEAKTNVI-LHDVEQKVVRYLL 341
>AF024503-2|AAG24099.1| 331|Caenorhabditis elegans Serpentine
receptor, class j protein5 protein.
Length = 331
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 140 GAHWTWLSPDCCSTN 184
GA WTWL C S N
Sbjct: 141 GASWTWLCEGCLSPN 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,655,876
Number of Sequences: 27780
Number of extensions: 173391
Number of successful extensions: 413
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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