Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31094
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.96 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.8  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   6.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   6.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.9  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 336 RVPCTTTTRNTPRLLSLPIKSNLNINPSPNIKLSLR 443
           R+      R+T  +  +  K +L INP P+I  +LR
Sbjct: 601 RIMKAQALRDTSTMGYMAAKKHLEINPDPSILKNLR 636


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 614 PASPGIAPQPYRPQPNRWAP 673
           P++ G  P    P+P +W P
Sbjct: 419 PSADGSKPVQTTPKPGQWVP 438


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 130 RFLDILLRVQPDGRV 86
           RFL+  LR++P+GR+
Sbjct: 200 RFLNQYLRLKPEGRI 214


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 130 RFLDILLRVQPDGRV 86
           RFL+  LR++P+GR+
Sbjct: 218 RFLNQYLRLKPEGRI 232


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 669  PPYRPPSSLRH 701
            P YRPPS+  H
Sbjct: 1172 PSYRPPSTTNH 1182


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 696 RHPDRSRATRSRFPLNLSTHRSLLIRSPR 782
           +HPD         P+ +S+H  L+   PR
Sbjct: 137 KHPDPGSLQVPGAPMMMSSHGPLMYGQPR 165


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +2

Query: 596 SQYRVGPA--SPGIAPQP---YRPQPNRWAPVPAPLFP 694
           + ++ GP    P I  QP    +P  N  A +P+PL+P
Sbjct: 197 NMHQQGPPHQQPPIQQQPNQGQQPPGNTAAALPSPLYP 234


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +2

Query: 596 SQYRVGPA--SPGIAPQP---YRPQPNRWAPVPAPLFP 694
           + ++ GP    P I  QP    +P  N  A +P+PL+P
Sbjct: 199 NMHQQGPPHQQPPIQQQPNQGQQPPGNTAAALPSPLYP 236


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 249 KSVTAKDTVRRKWCGLQYPKRTDIIIHNSRV 341
           K +  K+ V + W   Q+P   D+I    RV
Sbjct: 467 KYLDKKNVVVQSWGASQWPDTPDLISDGYRV 497


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 701 VSEGRGGPVRGPSDLAVACRVAVRCPGTPD 612
           ++EG  GP +G    A A   A    G PD
Sbjct: 110 IAEGVAGPEKGGGAGAAASGSAAAQAGQPD 139


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 302 PETNGYHNPQQQSPVYDNN 358
           P ++  H+P  Q+ +Y NN
Sbjct: 37  PPSDKLHHPIHQTVIYHNN 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,150
Number of Sequences: 336
Number of extensions: 3875
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)