Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31094
(823 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 33 0.28
SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_5438| Best HMM Match : MCPsignal (HMM E-Value=9.2) 33 0.28
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 33 0.37
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 32 0.49
SB_58524| Best HMM Match : Ank (HMM E-Value=3.4e-16) 32 0.65
SB_47879| Best HMM Match : ATP-synt_Eps (HMM E-Value=3.8) 32 0.65
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 31 0.85
SB_3701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 31 1.5
SB_25452| Best HMM Match : CTF_NFI (HMM E-Value=1.2) 30 2.0
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 30 2.6
SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_37879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_369| Best HMM Match : Pox_A32 (HMM E-Value=0.2) 29 3.4
SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 29 4.6
SB_46380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19) 29 4.6
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 4.6
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 29 6.0
SB_39971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 6.0
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_35849| Best HMM Match : Fibrinogen_C (HMM E-Value=0.15) 28 8.0
SB_5696| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5) 28 8.0
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 28 8.0
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = -3
Query: 704 RVSEGRGGPVRGPSDLAVACRVAVRCPGTPDPHGTARETRATQSLPAQRESAYSGQFALD 525
R SE R G +R S C+ RCP PD GT E R ++ + ALD
Sbjct: 259 RCSE-RVGAIRRWSATCRPCQCRGRCPALPD--GTLVENRIGTKFNKAENISFEDERALD 315
Query: 524 DVPHRTLAETGDT 486
D+ H T + T
Sbjct: 316 DLRHNTKFRSDQT 328
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2
Query: 642 GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G +PGD GP R +GDKGD PG TG
Sbjct: 189 GPQGIPGDMGP-RGAKGDKGDRGKPGETG 216
>SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1453
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 640 LRCDARGRRTHTVLRGRQGRRSHSRPNGN 554
+ C G+R HT+L G + RRS+ RP+ N
Sbjct: 177 ISCSECGKRNHTLLHGAKPRRSNPRPHTN 205
>SB_5438| Best HMM Match : MCPsignal (HMM E-Value=9.2)
Length = 194
Score = 33.1 bits (72), Expect = 0.28
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Frame = +1
Query: 55 HRPEDSTQAVQLAHRVVLATEYQGNAQQTPEKPRQRICRNRLQQPDNG*AS*LS*FRRPK 234
+R E +QA + ++RV ++ ++ + + + NR++QP S R K
Sbjct: 58 NRVEQPSQATESSNRVKQPSQATESSNRVKQPSQATESSNRVKQPSQATES----SNRVK 113
Query: 235 NVRRGRA*PQRIQSEESGVASSTRNERIS*STTAESRVRQ-QRATLPVCSASL-SKATSI 408
R R++ SS R E+ S +T + +RV Q RAT S+AT
Sbjct: 114 QPSRATESSNRVEQPSRATESSNRVEQPSRATESSNRVEQPSRATESSNRVEQPSRATES 173
Query: 409 STRAPISSSAS 441
S R S A+
Sbjct: 174 SNRVEQPSRAT 184
Score = 31.5 bits (68), Expect = 0.85
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = +1
Query: 34 NERPRDGHRPEDSTQAVQLAHRVVLATEYQGNAQQTPEKPRQRICRNRLQQPDNG*AS*L 213
++ +R + +QA + ++RV ++ ++ + + R NR++QP S
Sbjct: 77 SQATESSNRVKQPSQATESSNRVKQPSQATESSNRVKQPSRATESSNRVEQPSRATES-- 134
Query: 214 S*FRRPKNVRRGRA*PQRIQSEESGVASSTRNERIS*STTAESRVRQ-QRAT 366
R + R R++ SS R E+ S +T + +RV Q RAT
Sbjct: 135 --SNRVEQPSRATESSNRVEQPSRATESSNRVEQPSRATESSNRVEQPSRAT 184
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 593 PSQYRVGPASPGIAPQPYRPQPNRWAPVP 679
P QY P APQPYRP P + P P
Sbjct: 536 PLQYGPAPNKYRPAPQPYRPAPEPYRPAP 564
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 563 GPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPAPLFP 694
G G +P+ + P G AP YRP P + P P P P
Sbjct: 519 GYGGQITPIPNPMMQQQPLQYGPAPNKYRPAPQPYRPAPEPYRP 562
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 590 SPSQYRVGPASPGIAPQPYRPQPNRWAPV 676
+P++YR P AP+PYRP P R A V
Sbjct: 542 APNKYRPAPQPYRPAPEPYRPAPFRPAQV 570
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPAS--PGIAPQPYRPQPNRWAPVPAPLFPQTP 703
P P + +PL P + PA P I P P P P++ P P P+TP
Sbjct: 203 PPTPPMPETPLPPGSPHIPPAPLHPHIPPAP--PNPSKAIATPNPPMPETP 251
>SB_58524| Best HMM Match : Ank (HMM E-Value=3.4e-16)
Length = 1003
Score = 31.9 bits (69), Expect = 0.65
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = -3
Query: 815 KVVQSASVWSGTRAPNKETAMSTEIEGKSAACSSAAIRVSEGRG-GPVRGPSDLAVACRV 639
+V + + SG E +ST GK + A + +GR G +RG D ++C +
Sbjct: 213 EVSEEKEITSGEVGKASELGLSTTA-GKKTEDNLAQAQTMKGRTRGNIRGEEDRKISCEM 271
Query: 638 AVR-CPGTPDPHGTARETRATQSLPAQRESAYS-GQFALDDVPHRTL 504
R C T P+ RETR + Q SA + D P R +
Sbjct: 272 FTRSCSVTEKPN---RETRNDRKKFRQSYSAKEHSRCTTKDAPQRVI 315
>SB_47879| Best HMM Match : ATP-synt_Eps (HMM E-Value=3.8)
Length = 267
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 640 LRCDARGRRTHTVLRGRQGRRSHSRPNGN 554
+ C G+R HT+L G + RRS+ RP N
Sbjct: 64 ISCSECGKRHHTLLHGAKPRRSNPRPQTN 92
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +2
Query: 509 FCEGRRQEQTGLSKLI---PVGPGVTASPL--SPSQYRVGPASPGIAPQPYRPQPNRWAP 673
F GR+Q S LI P+ P + +P+ SPS P P + P +P P+ +
Sbjct: 1235 FKYGRQQHIGSPSSLISYKPIKPSPSTTPIKPSPSTTSTTPIKPSPSTNPIKPSPSTTST 1294
Query: 674 VPAPLFPQT 700
P P T
Sbjct: 1295 TPIKPSPST 1303
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 560 VGPGVTASPLSPSQYRVGP-ASPGIAPQPYRPQPNRWAPVPAP 685
V PG+ A P +P P A PG+ P P P P PAP
Sbjct: 172 VSPGILAPPPAPPGVLAPPPAPPGVLPPPPAPPGALIPPPPAP 214
>SB_3701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Frame = +1
Query: 34 NERPRDGHRPEDSTQAVQLAHRVVLATEYQGNAQQTPEKPRQRICRNRLQQPDNG*AS*L 213
++ +R + +QA + ++RV ++ ++ + + R NR++QP S
Sbjct: 60 SQATESSNRVKQPSQATESSNRVKQPSQATESSNRVKQPSRATESSNRVEQPSRATES-- 117
Query: 214 S*FRRPKNVRRGRA*PQRIQSEESGVASSTRNERIS*STTAESRVRQQRATLPVCS--AS 387
R + R R++ SS R ++ S +T + +RV+Q +
Sbjct: 118 --SNRVEQPSRATESSNRVEQPSQATESSNRVKQPSQATESSNRVKQPSQATESSNRVKQ 175
Query: 388 LSKATSISTRAPISSSAS 441
S+AT S R + S S
Sbjct: 176 PSQATESSNRVKLISRGS 193
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 729 CCV*LGCDPGV*GKRGA-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTGI 553
C + + G G+RG G GL G MPG AGP KGD +PG +G
Sbjct: 517 CSIGVRAPDGANGQRGVTGPSGSPGPGGLQGAAGMPGPAGP-------KGDRGSPGVSGA 569
Query: 552 S 550
S
Sbjct: 570 S 570
>SB_25452| Best HMM Match : CTF_NFI (HMM E-Value=1.2)
Length = 1056
Score = 30.3 bits (65), Expect = 2.0
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Frame = -3
Query: 815 KVVQSASVWSGTRAPNKETAMSTEIEGKSAACSSAAIRVSEGRGGPVRGPSDLAVACRVA 636
K ++S W+GT P T ST+ G + +R RGG G DL A A
Sbjct: 756 KRTSASSNWAGTGVPKPSTRPSTKARGTLSGPGPPFLRERSQRGG---GTYDLDTALHAA 812
Query: 635 VRC---PGTPDPHGTARETRATQSLPAQ----RESAYSGQFALDD 522
+P P T R + A Q + R A++ A+DD
Sbjct: 813 EDIFYEDLSPAPQPTIRPSCAAQEGSTKDVQDRSWAHNAPDAIDD 857
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 566 PGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPAPLFPQTP 703
PG P+ V P G P Y PQP P P +P P
Sbjct: 132 PGAAGPPMPHPTASVYPPPGGYPPTSYPPQPYPAQPYPQQGYPPQP 177
>SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 80 QFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPAN 211
Q + PI + + + L + L+++ + +D +NP +D PAN
Sbjct: 23 QNSEPITGNAADRLHDYLEEQLRSISGSTKTLDLSNPNSDHPAN 66
>SB_37879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 14/80 (17%)
Frame = +2
Query: 161 GSVGIDFNNPTTDKPAN-----LANSAVLRMLEEEERNRKGYSQK-------KVVWPPVP 304
G + + F +P P++ A+S+ L E +N Y+Q K++W P
Sbjct: 238 GFICVIFVSPKISLPSSKDFQVFASSSTLEQYEMNVKNNIRYAQGQGWGLWVKLIWGVKP 297
Query: 305 ETNGYH-NPQQQSPV-YDNN 358
E NG+H NP + Y+NN
Sbjct: 298 EDNGHHLNPDDLGTLTYENN 317
>SB_369| Best HMM Match : Pox_A32 (HMM E-Value=0.2)
Length = 856
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 618 RPRASHRNPTGHSQIAG---PPYRPPSSLRHPDRSRATRSRFPLNLSTHRSLLIRSPRTR 788
R A ++ TG +A PP RPP S DR R RF L S + L R R
Sbjct: 697 RTLAVNQRATGPLVVADDVTPPARPPHSRPRIDRLPFRRQRFVLPDSANLDCLARRLHQR 756
Query: 789 PHR 797
P R
Sbjct: 757 PLR 759
>SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 618 RPRASHRNPTGHSQIAG---PPYRPPSSLRHPDRSRATRSRFPLNLSTHRSLLIRSPRTR 788
R A ++ TG +A PP RPP S DR R RF L S + L R R
Sbjct: 660 RTLAVNQRATGPLVVADDVTPPARPPHSRPRIDRLPFRRQRFVLPDSANLDCLARRLHQR 719
Query: 789 PHR 797
P R
Sbjct: 720 PLR 722
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPYRPQPN-RWAPVPAPLFPQTP 703
PL P P + P PY P PN + P P P +P P
Sbjct: 159 PLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPP 199
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 614 PASPGIAPQPYRPQPNRWAPVPAPLFPQTP 703
P P + P+P P P ++APVP P P P
Sbjct: 752 PLPPKVTPKP--PAPPQFAPVPPPCAPIPP 779
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 615 RRPRASHRNPTGHSQIAGPPYRPP--SSLRHPDRSRATRSRFPLNLSTHRSLLIRSPRTR 788
R PR R+P S R P +S RH +RSR RSR + S HR SP R
Sbjct: 223 RSPRKRSRSPRKGSHTPKKRSRSPRRNSQRHKERSRYHRSR---SRSRHRRSRSNSPSMR 279
>SB_46380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = +2
Query: 110 QQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRMLEEEERNRKGYSQKKVV 289
Q +I++ + L D G +F + + + +A++R E +ER ++ K+
Sbjct: 54 QPDIRQRRRRDLNETDTGK---NFARNESREETPMTRAAIIRRREGQEREGGKFTVLKIT 110
Query: 290 WPPVPETNGYHNPQQQSPVYD 352
E G P +SP+ D
Sbjct: 111 IKNHNEDTGTAKPSSRSPIED 131
>SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19)
Length = 951
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 605 RVGPASPGIAPQ-PYRPQPNRWAPVPAPL 688
R P +P PQ PY+P PN W P L
Sbjct: 604 RFSPYAPNTFPQMPYQPMPNPWMSRPQML 632
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 569 GVTASPLSPSQYR-VGPASPGIAPQPYRPQPNRWAPVP 679
G P SPS R GP SP + QP P R AP P
Sbjct: 416 GQLKPPSSPSPRRQTGPPSPKPSRQPPPSSPQRIAPTP 453
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 575 TASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPAPLFPQTP 703
+A PL P + P S P P +P P P P P P P
Sbjct: 1037 SAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPP 1079
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 615 RRPRASHRNPTG-HSQIAGPPYRPPSSLRHPDRSRATRSRFPLNLSTHRSLLI 770
R R++ R+P HS PPYR S R P R R + + + + +++I
Sbjct: 508 RSHRSTSRSPRRRHSPSVSPPYRRRSRSRSPQRQRLGKYGRDITCTRYGTIII 560
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPAPLFPQTP 703
P PG A P P P G AP P P P AP P P P P
Sbjct: 945 PPPPGGNAPPPPPPPGGSAPPPGGGAP-PLPPPPGGSAPPPPPPPPPPP 992
>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
Length = 631
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +2
Query: 539 GLSKLIPVGPGVTASP----LSPSQYRVGPASPGIAPQPYRPQPNRWAPVPAPLFPQT 700
GL IP P T +P + P V P + PQP +P + P P P+T
Sbjct: 137 GLCNKIPSPPNPTEAPEPETVPPQPETVPPQPETVPPQPGSEEPEPVSQAPEPPKPKT 194
>SB_39971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 174 IPTDPLSRFFRCLLSVSLIFCCE 106
IPTDPLS +R + +L FC E
Sbjct: 396 IPTDPLSANYRSAQTSALFFCAE 418
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 614 PASPGIAPQPYRPQPNRWAPVPAPLFPQTPG 706
P+S G P P P P R AP P P+ P G
Sbjct: 386 PSSLGNPPPP--PPPGRGAPPPGPMIPGRAG 414
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPAPLFPQTP 703
PLS +Y GP+ P RP P R AP P++P+ P
Sbjct: 944 PLSWPKYPYGPSHYRQTPYWPRPHPRR-APHQYPVWPRPP 982
>SB_35849| Best HMM Match : Fibrinogen_C (HMM E-Value=0.15)
Length = 631
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -2
Query: 690 KRGAGTGAQRFGCGL*G--CGAMPGDAGPTRYCEGDKGDAVTPG 565
+ G+ R G G G CG AG C+GDKG+ G
Sbjct: 581 ENNCGSTDSRIGFGASGTACGQSSSSAGNEARCDGDKGNKSVAG 624
>SB_5696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPAPLFPQTP 703
P PSQ + A P I +P P P + P APL TP
Sbjct: 194 PTGPSQ-PLPAAVPPIKTKPAAPSPVKATPTVAPLVKATP 232
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 642 PTGHSQIAGPPYRPPSSLRHPDRSRATRSR 731
P+GH + PP PP S H R T S+
Sbjct: 2201 PSGHPPMGAPPMGPPPSGSHSPAPRGTISQ 2230
>SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5)
Length = 520
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +3
Query: 300 YPKRTDIIIHNSRVPCTT----TTRNTPRLLSLPIKSNLNINP 416
Y +R D ++H+ +PCTT +NT +S + +L P
Sbjct: 69 YLRREDCVVHSGSLPCTTGEGGAAKNTVHRISTAVYESLGKAP 111
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPAPLFPQTP 703
P PSQ + A P I +P P P + P APL TP
Sbjct: 249 PTGPSQ-PLPAAVPPIKTKPAAPSPVKATPTVAPLVKATP 287
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,787,771
Number of Sequences: 59808
Number of extensions: 553377
Number of successful extensions: 2778
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2729
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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