Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31093
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   3.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +2

Query: 395 YAGIIQLLLVTQCESLCLSFKRKLDLQMSYCRNVFSRKVSIPPMT 529
           + G+    L T C+ L +S  +K+   + + +++  R     P+T
Sbjct: 119 FGGVRDHNLTTLCQELGISVVQKVSHTLYHLQDIIDRNGGRAPLT 163


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 714 FIMTRPNPGTVLTN 755
           F+ +RP+P T+++N
Sbjct: 222 FVKSRPSPATIISN 235


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 714 FIMTRPNPGTVLTN 755
           F+ +RP+P T+++N
Sbjct: 222 FVKSRPSPATIISN 235


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 714 FIMTRPNPGTVLTN 755
           F+ +RP+P T+++N
Sbjct: 542 FVKSRPSPATIISN 555


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 334 YFLKHKHRYENYNVNLSYIPVRWYHP 411
           Y    KH  ++Y +N +  P   Y+P
Sbjct: 294 YRTDRKHTQQHYQMNQNMYPGEMYNP 319


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = -3

Query: 762 IIYLSKRYQGLGESL*IVNDK*IKI*HLVISVDMSYAACLRLHFKQTYLLRVMIVVLLLF 583
           +IY+    +GLG+   I + K +K+   +IS+   +   L L      +LR    ++++ 
Sbjct: 171 LIYIDDNVKGLGKQYNIASSKTLKLSINIISLVQLWIFQLYLLILCDQILREFDQIVVIL 230

Query: 582 S 580
           S
Sbjct: 231 S 231


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 334 YFLKHKHRYENYNVNLSYIPVRWYHP 411
           Y    KH  ++Y +N +  P   Y+P
Sbjct: 242 YRTDRKHTQQHYQMNQNMYPGEMYNP 267


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 334 YFLKHKHRYENYNVNLSYIPVRWYHP 411
           Y    KH  ++Y +N +  P   Y+P
Sbjct: 425 YRTDRKHTQQHYQMNQNMYPGEMYNP 450


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,608
Number of Sequences: 336
Number of extensions: 4018
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)