Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31079
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 260 8e-70
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 260 8e-70
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 260 8e-70
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 260 8e-70
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 260 8e-70
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 260 8e-70
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 259 1e-69
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 259 1e-69
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 259 1e-69
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 253 9e-68
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 246 1e-65
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 138 2e-33
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 114 6e-26
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 4e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 75 6e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 75 6e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 3.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 260 bits (636), Expect = 8e-70
Identities = 118/126 (93%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 251 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 371 VHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 260 bits (636), Expect = 8e-70
Identities = 118/126 (93%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 251 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 371 VHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 260 bits (636), Expect = 8e-70
Identities = 118/126 (93%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 251 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 371 VHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 260 bits (636), Expect = 8e-70
Identities = 118/126 (93%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 207 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 266
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 267 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 326
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 327 VHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 260 bits (636), Expect = 8e-70
Identities = 118/126 (93%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 237 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 296
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 297 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 356
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 357 VHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 260 bits (636), Expect = 8e-70
Identities = 118/126 (93%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 251 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 371 VHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 259 bits (634), Expect = 1e-69
Identities = 117/126 (92%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 251 VGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 371 VHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 259 bits (634), Expect = 1e-69
Identities = 117/126 (92%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 251 VGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 371 VHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 259 bits (634), Expect = 1e-69
Identities = 117/126 (92%), Positives = 123/126 (97%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 251 VGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 371 VHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 253 bits (619), Expect = 9e-68
Identities = 116/126 (92%), Positives = 122/126 (96%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGI
Sbjct: 251 VGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 311 ADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 370 VHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 246 bits (601), Expect = 1e-65
Identities = 111/126 (88%), Positives = 118/126 (93%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IGNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGI
Sbjct: 250 IGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGI 309
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP I
Sbjct: 310 ADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 370 VHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 138 bits (335), Expect = 2e-33
Identities = 62/126 (49%), Positives = 86/126 (68%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
I N FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G
Sbjct: 249 ISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGF 308
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G
Sbjct: 309 GDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASA 368
Query: 362 VHRKCF 379
+H++ F
Sbjct: 369 MHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 114 bits (274), Expect = 6e-26
Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 8/132 (6%)
Frame = +2
Query: 5 GNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTM 169
G ER + PE LF +L E + + S D+DIR L++N ++GG ++
Sbjct: 304 GAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSL 363
Query: 170 YPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKEEY 340
G +R+ + P TIK+++ A P ERKY WIGGSIL SL TFQQMW+SK EY
Sbjct: 364 ILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEY 423
Query: 341 DESGPGIVHRKC 376
DESG IV +KC
Sbjct: 424 DESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 113 bits (272), Expect = 1e-25
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 13/130 (10%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+G ERF PE LFQP + +E G+ E ++ I D+D R D Y + V+SGGTTMYPG+
Sbjct: 254 LGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGL 313
Query: 182 ADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMW 322
R++KE+ L A KI+I APP RK+ V++GG++LA+L Q W
Sbjct: 314 PSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFW 373
Query: 323 ISKEEYDESG 352
+SK+EY+E G
Sbjct: 374 VSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 100 bits (239), Expect = 1e-21
Identities = 40/112 (35%), Positives = 75/112 (66%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
I N RF C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 337
A+++++E++ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 4e-19
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 17/137 (12%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 178
+G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 278 VGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKD 337
Query: 179 IADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLSTF 310
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S F
Sbjct: 338 FARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEF 397
Query: 311 QQMWISKEEYDESGPGI 361
Q+ +K EY E GP I
Sbjct: 398 YQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +PG
Sbjct: 265 LGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGF 324
Query: 182 ADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 352
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE G
Sbjct: 325 RERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERG 380
Query: 353 PGI 361
+
Sbjct: 381 DSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +PG
Sbjct: 265 LGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGF 324
Query: 182 ADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 352
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE G
Sbjct: 325 RERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERG 380
Query: 353 PGI 361
+
Sbjct: 381 DSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = +2
Query: 86 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 250
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 251 PERK----YSVWIGGSILASL-STFQQMWISKEEY 340
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 73 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 216
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 172 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 270
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = +1
Query: 97 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 276
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 277 RWIHPG 294
H G
Sbjct: 487 HGTHHG 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,836,720
Number of Sequences: 27780
Number of extensions: 254329
Number of successful extensions: 760
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -