Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31079
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 241 4e-64
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 241 4e-64
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 240 7e-64
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 239 9e-64
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 239 9e-64
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 238 2e-63
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 233 8e-62
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 233 8e-62
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 220 8e-58
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 211 4e-55
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 197 6e-51
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 184 6e-47
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 122 2e-28
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 109 1e-24
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 101 6e-22
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 100 2e-21
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 73 1e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 70 2e-12
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 69 4e-12
At5g43500.2 68418.m05318 expressed protein 46 3e-05
At5g43500.1 68418.m05319 expressed protein 46 3e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.072
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 2.1
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 6.3
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 8.3
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 8.3
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 8.3
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 241 bits (589), Expect = 4e-64
Identities = 108/126 (85%), Positives = 117/126 (92%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI
Sbjct: 252 IGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGI
Sbjct: 312 ADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGI 371
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 372 VHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 241 bits (589), Expect = 4e-64
Identities = 108/126 (85%), Positives = 117/126 (92%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI
Sbjct: 252 IGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGI
Sbjct: 312 ADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGI 371
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 372 VHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 240 bits (587), Expect = 7e-64
Identities = 107/126 (84%), Positives = 116/126 (92%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGI
Sbjct: 252 IGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP I
Sbjct: 312 ADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSI 371
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 372 VHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 239 bits (586), Expect = 9e-64
Identities = 106/126 (84%), Positives = 117/126 (92%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGI
Sbjct: 252 IGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP I
Sbjct: 312 ADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSI 371
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 372 VHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 239 bits (586), Expect = 9e-64
Identities = 106/126 (84%), Positives = 117/126 (92%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGI
Sbjct: 252 IGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP I
Sbjct: 312 ADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSI 371
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 372 VHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 238 bits (583), Expect = 2e-63
Identities = 107/126 (84%), Positives = 116/126 (92%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG+TM+PGI
Sbjct: 252 IGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP I
Sbjct: 312 ADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSI 371
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 372 VHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 233 bits (570), Expect = 8e-62
Identities = 105/126 (83%), Positives = 114/126 (90%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI
Sbjct: 252 IGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP I
Sbjct: 312 GDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSI 371
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 372 VHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 233 bits (570), Expect = 8e-62
Identities = 105/126 (83%), Positives = 114/126 (90%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI
Sbjct: 252 IGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP I
Sbjct: 312 GDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSI 371
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 372 VHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 220 bits (537), Expect = 8e-58
Identities = 98/126 (77%), Positives = 109/126 (86%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQ S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGI
Sbjct: 253 IGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 312
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
ADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G I
Sbjct: 313 ADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAI 372
Query: 362 VHRKCF 379
VHRKCF
Sbjct: 373 VHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 211 bits (515), Expect = 4e-55
Identities = 94/126 (74%), Positives = 108/126 (85%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQPS +GME+ GIHE YNSIMKCD DIRKDLY N V+SGGTTM+ GI
Sbjct: 204 IGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGI 263
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 361
+RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP I
Sbjct: 264 EERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAI 323
Query: 362 VHRKCF 379
VH KCF
Sbjct: 324 VHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 197 bits (480), Expect = 6e-51
Identities = 90/110 (81%), Positives = 100/110 (90%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI
Sbjct: 252 IGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGI 311
Query: 182 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 331
ADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 312 ADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 184 bits (447), Expect = 6e-47
Identities = 80/122 (65%), Positives = 97/122 (79%)
Frame = +2
Query: 11 ERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADR 190
ERF CPE LFQPS +G ES GIHE NSI+KC VD R+D+Y N +M+GGTTM GI +R
Sbjct: 244 ERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKER 303
Query: 191 MQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHR 370
M KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI+K+EY+E G IVHR
Sbjct: 304 MTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHR 363
Query: 371 KC 376
KC
Sbjct: 364 KC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 122 bits (294), Expect = 2e-28
Identities = 60/140 (42%), Positives = 91/140 (65%), Gaps = 15/140 (10%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCDVDIRKDLYANT 145
IG +RF+ P+ +F PS + GME G+ V SI KCDVDIR++LY++
Sbjct: 301 IGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSI 360
Query: 146 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQ 316
+++GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQ
Sbjct: 361 LLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQ 420
Query: 317 MWISKEEYDESGPGIVHRKC 376
MW SK EY+E G + RKC
Sbjct: 421 MWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 109 bits (263), Expect = 1e-24
Identities = 58/132 (43%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
IG ER+ EALFQPS LG+E GI E + I + + L NTV+ GGTT G
Sbjct: 233 IGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGF 292
Query: 182 ADRMQKEITALAPSTIKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWISKEEYD 343
R QKE L S I+ ++ PPE YS W+GG+ILA + Q ++K +YD
Sbjct: 293 ESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYD 351
Query: 344 ESGPGIVHRKCF 379
E+GP +VHRKCF
Sbjct: 352 ETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 101 bits (241), Expect = 6e-22
Identities = 46/124 (37%), Positives = 72/124 (58%)
Frame = +2
Query: 8 NERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIAD 187
NERF PE LFQP+ LGM G+ E + +I C ++ LY + +++GG+T++P + +
Sbjct: 297 NERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKE 356
Query: 188 RMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVH 367
R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 357 RLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCR 416
Query: 368 RKCF 379
R+ F
Sbjct: 417 RRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/129 (38%), Positives = 80/129 (62%), Gaps = 12/129 (9%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 181
+G ERF+ PEALF P + +E G+ + V+ I + D+D R LY + V+SGG+TMYPG+
Sbjct: 251 VGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGL 310
Query: 182 ADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWI 325
R++KEI T L + ++++I PP RK+ V++GG++LA + + WI
Sbjct: 311 PSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWI 370
Query: 326 SKEEYDESG 352
++E+Y E G
Sbjct: 371 NREDYMEEG 379
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVD---IRKDLYANTVMSGGTTMY 172
IG ERFRCPE LF P+ +G++ G+ E SI + D + + L ++ +M+GG ++
Sbjct: 591 IGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLL 650
Query: 173 PGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 352
PG+ +R++ I + P I ++ + W G S A+ F +K +YDE G
Sbjct: 651 PGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDEKG 710
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 178
+G ERF PE F P + + + + I +D R+ LY N V+SGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 179 IADRMQKEITALAPS----------------TIKIKIIAPPERKYSVWIGGSILASLSTF 310
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
Query: 311 QQMWISKEEYDESGPGI 361
+KEEY+E G I
Sbjct: 400 FASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
Frame = +2
Query: 2 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD-VDIRKD--LYANTVMSGGTTMY 172
+ ERF+ E LFQP GM + +H+ V + CD + D + V++GG+
Sbjct: 345 LSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACL 404
Query: 173 PGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEY 340
PG+++R+++E+ PS+I I++I PP + W G ++++LS F W I+++++
Sbjct: 405 PGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +2
Query: 62 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 238
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 239 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 352
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +2
Query: 62 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 238
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 239 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 352
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.072
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 74 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 253
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 254 ERKYS 268
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +2
Query: 74 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 253
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 254 ERKYS 268
ERK++
Sbjct: 394 ERKHA 398
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 189 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 34
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 243
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 243
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 190 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 303
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,283,576
Number of Sequences: 28952
Number of extensions: 243260
Number of successful extensions: 774
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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