Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31076
         (789 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0197 + 1456296-1456668,1456930-1458746                           30   2.4  
11_01_0191 + 1508509-1508749,1508852-1509204,1509860-1510002,151...    29   4.2  
04_02_0046 - 9181351-9181791,9182143-9182439                           28   7.4  
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892...    28   7.4  
07_01_1006 + 8528508-8529285,8529376-8529544,8530179-8530445,853...    28   9.7  
05_01_0197 - 1417672-1417899,1418921-1418974,1419267-1419552,142...    28   9.7  

>12_01_0197 + 1456296-1456668,1456930-1458746
          Length = 729

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 79  ESQRWYYMYSVMSVLIILNMCIYVYCATLVCRKPFSSAHI 198
           E  +W+Y Y  + V  I+ +  + +   LV RK   S+ +
Sbjct: 377 EEPKWFYFYGFIGVFFIVEVFFFAFAWFLVLRKEMWSSEV 416


>11_01_0191 +
           1508509-1508749,1508852-1509204,1509860-1510002,
           1510195-1510256,1510406-1510479,1510812-1510864,
           1511072-1513550
          Length = 1134

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +1

Query: 79  ESQRWYYMYSVMSVLIILNMCIYVYCATLVCRKPFSSAHI 198
           E  +W+Y Y  + V  I+ +  + +    V RK   S+ +
Sbjct: 782 EEPKWFYFYGFIGVFFIVEVFFFAFAWFFVLRKEMRSSQV 821


>04_02_0046 - 9181351-9181791,9182143-9182439
          Length = 245

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 701 LSIIPFSPDRLEPLGSAEGLRFP 769
           L+++P SP  LEP+G   GL  P
Sbjct: 168 LAVVPGSPANLEPIGELRGLAEP 190


>01_05_0265 +
           20188160-20188211,20188291-20189019,20189103-20189231,
           20189857-20189938,20190034-20190166,20190269-20190340,
           20190478-20190573,20190651-20190764,20190838-20191050,
           20191144-20191242,20191328-20191488,20191589-20191685,
           20191828-20191989,20192068-20192148,20192242-20192320,
           20192414-20192550,20192638-20192688,20192776-20192844,
           20193583-20193700,20194142-20194197
          Length = 909

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 389 VLITRGRRTTSTTNIRKPCKVLKTSNIVHTICASVNVLIISKIQNNP 249
           V++ RGR T      ++ CK   +  +VH  C   +  II K+Q  P
Sbjct: 299 VMVDRGRVTEPHICQKEQCKATNSMTLVHNRCRFADKQII-KLQETP 344


>07_01_1006 +
           8528508-8529285,8529376-8529544,8530179-8530445,
           8530533-8530878,8530964-8531101,8531197-8531322,
           8531422-8531634,8531721-8531863,8531891-8532009,
           8532099-8532295,8532379-8532729,8532811-8533395
          Length = 1143

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +1

Query: 178 PFSSAHIKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTI 312
           P SS+ I    Y++ ++IRL+VL G F+ + ++    +A  +W I
Sbjct: 329 PISSSRINP--YRMIIIIRLVVL-GFFFHYRVMHPVNDAFALWLI 370


>05_01_0197 -
           1417672-1417899,1418921-1418974,1419267-1419552,
           1421768-1422291
          Length = 363

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 474 TFVLRIIDHGQTFFHHSGHTKEEA 403
           ++   +IDHGQTFF  S   +E A
Sbjct: 189 SYPTNLIDHGQTFFSSSRELRERA 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,955,812
Number of Sequences: 37544
Number of extensions: 501154
Number of successful extensions: 1352
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)