Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31076
(789 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1011| Best HMM Match : 7tm_2 (HMM E-Value=2e-40) 42 8e-04
SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_14117| Best HMM Match : 7tm_2 (HMM E-Value=2.4e-25) 37 0.021
SB_855| Best HMM Match : 7tm_2 (HMM E-Value=5.4e-12) 36 0.028
SB_38952| Best HMM Match : 7tm_2 (HMM E-Value=1.7e-21) 34 0.11
SB_35287| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 34 0.15
SB_39597| Best HMM Match : 7tm_2 (HMM E-Value=2.9e-13) 33 0.26
SB_13570| Best HMM Match : PMP1_2 (HMM E-Value=2.9) 33 0.26
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 32 0.46
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_15308| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-33) 31 0.80
SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40) 31 0.80
SB_4414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_36244| Best HMM Match : 7tm_2 (HMM E-Value=1.2e-12) 31 1.4
SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0) 31 1.4
SB_21777| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-06) 30 1.9
SB_57270| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_44152| Best HMM Match : CRAM_rpt (HMM E-Value=0.021) 29 4.3
SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11) 29 4.3
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_32978| Best HMM Match : GATA (HMM E-Value=5.5) 29 5.7
SB_39231| Best HMM Match : zf-C2H2 (HMM E-Value=3.4e-31) 28 7.5
SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39) 28 7.5
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 28 7.5
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.5
SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 28 7.5
SB_4665| Best HMM Match : 7tm_2 (HMM E-Value=2.5e-11) 28 7.5
SB_40049| Best HMM Match : LRR_1 (HMM E-Value=0.082) 28 9.9
SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09) 28 9.9
>SB_1011| Best HMM Match : 7tm_2 (HMM E-Value=2e-40)
Length = 406
Score = 41.5 bits (93), Expect = 8e-04
Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = +1
Query: 91 WYYMYSVMSVLIILNMCIYVYCATLVCRKPFSSAHI--KEMRYKLWLMIR----LLVLMG 252
W ++ + VL+I N+ ++V LV R+ + H+ K KL + ++ +L L+G
Sbjct: 281 WAFVAPALVVLMI-NIIVFV----LVLRQTMGTRHVQNKSRDEKLRVAVKATAVILPLLG 335
Query: 253 LFWIFEMISTFTEAHIVWTILDVFNTLQGFLMFVVLVVLRPRVIKTIHQR 402
+ W+F +++ E I + N+LQG ++F+ VL ++ + +R
Sbjct: 336 ITWLFGLLAFSAETVAFKYIFAILNSLQGLMIFIFHCVLNKQIQDAVKRR 385
>SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1820
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +1
Query: 91 WYYMYSVMSVLIILNMCIYVYCA-TLVCRKPFSSAHIKEM-RYKLWLMIRLLVLMGLFWI 264
W ++ + + + +N+ +Y L C + K + RY++ + ++VL+GL W+
Sbjct: 1606 WIAWFAPVLLTLTINIVVYALVVHKLGCTDAMVNPEKKSVQRYRVRTALAIMVLLGLTWL 1665
Query: 265 FEMISTFTEAHIVW--TILDVFNTLQGFLMFV 354
F +S + V + +FN+LQG +F+
Sbjct: 1666 FGALSFGDKLQRVTFEYLFCIFNSLQGLFIFI 1697
>SB_14117| Best HMM Match : 7tm_2 (HMM E-Value=2.4e-25)
Length = 294
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 LLVLMGLFWIFEMISTFTEAHIVWTIL-DVFNTLQGFLMFVVLVVLRPRVIKTIHQR 402
L L+GL W+F +++ T+A +V+ L + N+LQG L+F VL VLR I+ +R
Sbjct: 159 LFPLLGLTWVFGVLAV-TDAGLVFQYLFTILNSLQGLLIF-VLHVLRSSEIRHAFER 213
>SB_855| Best HMM Match : 7tm_2 (HMM E-Value=5.4e-12)
Length = 701
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 118 VLIILNMCIYVYCATLVCRKPFSSAHIKEMRYKLW-LMIRLLVLMGLFWIFEMISTFTEA 294
+L++ N ++V+ + R P H K R + I + VL GL W+F ++ T
Sbjct: 474 LLVVGNTVVFVFVMREIYRMPH--LHEKRSRVAQFRASISVFVLFGLNWVFAGLAATTPT 531
Query: 295 HIVWTILDVFNTLQGFLMFVV 357
++ + + + QGF++F++
Sbjct: 532 LVMQYLFTITCSFQGFMIFIL 552
>SB_38952| Best HMM Match : 7tm_2 (HMM E-Value=1.7e-21)
Length = 959
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Frame = +1
Query: 97 YMYSV-MSVLIILNMCIYVYCATLV-CRKPFSSAHIKEMRYKLWLMI--RLLVLMGLFWI 264
Y++ + +S+ ++ N +V + K S A + E K +++ ++ LMG W+
Sbjct: 823 YIFVIPVSLALVWNAVFFVLTVKAIRVAKQQSRAAVNEGDQKRDIVVYAKIASLMGFAWV 882
Query: 265 FEMISTFTEAHIVWTILDVFNTLQGFLMFVVLVVLRPRVIKTIHQR 402
F +++ F ++++ + +F T QG + V V R RV K Q+
Sbjct: 883 FGILAAFISEYLMFPFV-IFTTAQGVFIAVSFVFTR-RVWKLYAQK 926
>SB_35287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +1
Query: 235 LLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQGFLMFV 354
+L L+G+ W+F +++ T+ + + V N+LQGF +F+
Sbjct: 261 ILPLLGITWVFGLLTFGTDTLVFKYLFAVCNSLQGFAVFI 300
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +1
Query: 121 LIILNMCIYVYCATLVCR--KPFSSAHIKEM-RYKLWLMIRLLVLMGLFWIFEMISTFTE 291
L+I N+ +V + + K S A KE R L + ++ LMG W+F ++ FT
Sbjct: 1203 LLIWNIVFFVLTVVAIRKVMKQSSMAQDKESNRNDLVIYAKIASLMGFTWLFGFLAPFTT 1262
Query: 292 AHIVWTILDVFNTLQGFLMFVVLVV 366
+++ + + N+LQG + V ++
Sbjct: 1263 YFLMFPFV-ICNSLQGVFIAVAFLM 1286
>SB_39597| Best HMM Match : 7tm_2 (HMM E-Value=2.9e-13)
Length = 1052
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 181 FSSAHIKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQG 339
F+S+ ++ + W+ +R+ +MG W+F I+ +W + + N LQG
Sbjct: 945 FASSDSRQKAH-FWIYLRIAAIMGFTWVFGFIAA-VGITALWYVFVILNCLQG 995
>SB_13570| Best HMM Match : PMP1_2 (HMM E-Value=2.9)
Length = 126
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 181 FSSAHIKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQG 339
F+S+ ++ + W+ +R+ +MG W+F I+ +W + + N LQG
Sbjct: 56 FASSDSRQKAH-FWIYLRIAAIMGFTWVFGFIAA-VGITALWYVFVILNCLQG 106
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 223 LMIRLLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQGFLMFVVLVVLRPRVIKTIHQR 402
+ IRL LMG W F + +T +++ + V TLQG +F+ + + RV++ ++
Sbjct: 336 IYIRLTSLMGFSWFFGISATLIHHALMYPFV-VMTTLQGVYIFLAF-ICKARVLRMFKEK 393
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +1
Query: 223 LMIRLLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQGFLMFVVLVVLR 372
+ ++ MG+ W+ ++ +W + N+LQGFL+ + V+ R
Sbjct: 110 ICFKMTSAMGITWVLAYFASTQATSFLWYAFVILNSLQGFLILLSYVLNR 159
>SB_15308| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-33)
Length = 429
Score = 31.5 bits (68), Expect = 0.80
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +1
Query: 97 YMYSVMSVLIILNMCIYVYCATLVCRKPFSSAHIKEMR------YKLWLMIRLLVLMGLF 258
Y+ +V+ + I N+C Y + KPF I R + W + L+ L+ L
Sbjct: 204 YVIAVLLLASIFNLCAVTYERFVALTKPFGYRVIMNKRKVSIIIFASWFIPVLISLLPLA 263
Query: 259 WIFEMISTFTEAHIVWTILDVFNTLQGFLMFVVLVVLRPRVIKTIHQR 402
W + S + +A+++ T++ +F L M V L ++I+ QR
Sbjct: 264 WHADPSSPYHKAYMIITLI-LFVLLPCVAMIWVYARLL-KIIRNFIQR 309
>SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40)
Length = 956
Score = 31.5 bits (68), Expect = 0.80
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 88 RWYYMYSVMSVLIILNMCIYV---YCATLVCRKPFSSAHIKEMRYKLWLMIRLLVLMGLF 258
RW ++ V+ +L I N+CI + + ++ P + + LL L+GL
Sbjct: 610 RWVFIGPVLIILAI-NLCIMIKVLHIMMVLQNDPLKKKKNSRLSSLAKGLAVLLPLLGLT 668
Query: 259 WIFEMISTFTEAHIVWTILDVFNTLQ 336
W+F ++ ++ + I V N+LQ
Sbjct: 669 WLFGVLCVNSQTIVFQYIFAVLNSLQ 694
>SB_4414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 877
Score = 31.5 bits (68), Expect = 0.80
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Frame = +1
Query: 136 MCIYVYCATLVCRK-PFSSAHIKEMRYKLWLMIRL-----LVLMGLFWIFEMISTFTEAH 297
+C V C +C PF H+ + Y+LW+ I L +L L + F ++ E
Sbjct: 645 LCSQVDCLGPICGMIPFLKQHVPDQIYRLWMAIFLHAGIIHLLCTLVFNFTILRDL-ERM 703
Query: 298 IVW---TILDVFNTLQGFLMFVVLVVLRPRVIKTIHQRGLFFCM 420
W +I+ +F+ + G+L+ +L+ + V + G+ C+
Sbjct: 704 AGWIRISIIYIFSGIGGYLISAILIPYQVEVGPSGSMFGIIACL 747
>SB_36244| Best HMM Match : 7tm_2 (HMM E-Value=1.2e-12)
Length = 849
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +1
Query: 97 YMYSV-MSVLIILNMCIYVYCATLV---CRKPFSSAHIKEMRYKLWLMIRLLVLMGLFWI 264
Y++++ +++ +++N Y+ + ++ +A + R + +RL +MG W+
Sbjct: 541 YVFAIPIALALVVNAIFYILTVNAIKAATQQARMAAENSQTRRHFGIYVRLAAVMGFTWV 600
Query: 265 FEMISTFTEAHIVWTILDVFNTLQG 339
F + F + + W + N LQG
Sbjct: 601 FGFGAAFLWSPL-WYVFVSLNCLQG 624
>SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1627
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 165 CMSEAVFVGAYQRNALQIVADDTSFSADGIVLDLRNDQ 278
C+ +F L +V DD ++ A G+V DL D+
Sbjct: 1236 CLQPLIFQSGIHLGTLPVVTDDATYGAGGLVADLGYDR 1273
>SB_21777| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-06)
Length = 341
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 124 IILNMCIYVYCATLVCRKPFSSAHIKEMRYKLWLMIR-LLVLMGLFWIFEMISTFTEAHI 300
I+ NM +Y C V R F +K Y+ + L + WIF+++ F A
Sbjct: 108 ILSNMTVYTICLIAVNRLLF---FVKSSWYRAIFGFKSTLTTIATSWIFQLVYAFIPAFA 164
Query: 301 VWTILDVF 324
W++ ++
Sbjct: 165 SWSVASLY 172
>SB_57270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 29.9 bits (64), Expect = 2.5
Identities = 36/147 (24%), Positives = 51/147 (34%), Gaps = 9/147 (6%)
Frame = -1
Query: 618 TAAAKGSSSLISYIT-HKYYSIT*FYAGGILHLAYGRLFIGHSDLRV-HDTFVLR----I 457
TA + S++ I Y T H YS T H Y + HS V H + ++
Sbjct: 5 TAHIQYSTAHIQYSTAHIQYS-TAHIQYSTAHTQYSPYTVQHSPYTVQHSPYTVQHSSYT 63
Query: 456 IDHGQTFFHHSGHTKEEAALVDGFDNARTQDHKY---HKH*EAL*SVEDVQYSPHNMCFS 286
+ H HS +T + + + Q Y H S VQ+SP+ + S
Sbjct: 64 VQHSPYTVQHSPYTVQHSPYTAQHSSCTVQHSPYTVQHSPYTVQHSPCTVQHSPYTVQHS 123
Query: 285 ECTDHFEDPKQSHQH*KTYHQPQFVTH 205
CT H H P V H
Sbjct: 124 PCTVQHSPYTVQHSPYTVQHSPYAVQH 150
>SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 100 MYSVMSVLIILNMCIYVYCATLVCRKPFSSAHIKEMRYKL---WLMIRLLVLMGLFWIFE 270
M++ +S++I+ N+ + + L RK ++ + K +L+ +L +MG WI
Sbjct: 622 MHAPVSMVIVFNL-VALLRTVLAIRKTQKTSRMARENGKNPLPYLIAKLSCVMGFTWILG 680
Query: 271 MISTFTEAHIVWTILDVFNTLQG 339
++ ++ +V + N+LQG
Sbjct: 681 LMVGLVDSTLVLYTYTILNSLQG 703
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 16 IFFKLSTLANH*IFAAVALIRESQRWYYMYSVMSVLIILNMCIYVYCATLV 168
I+F S + + + + L +E + YY Y+V+ VL + + I V T++
Sbjct: 156 IWFAASLITTFNVVSLLVLFKELKYIYYFYAVVGVLAVCGVIILVSLLTVM 206
>SB_44152| Best HMM Match : CRAM_rpt (HMM E-Value=0.021)
Length = 697
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 780 YKYRGNRSPSADPRGSKRSGENGIIDNPNGPPLYGVK*KKLVFGSINSIRKPDVTAAAKG 601
+K++G + P G++G ID +GP G K K V SI+ PD+ +A G
Sbjct: 89 WKFKGPKMPKFKGPSFGGKGKSGDIDY-DGPDFDGPKVKANVEVPDASIKGPDIDGSAGG 147
Query: 600 SSSL 589
+L
Sbjct: 148 GINL 151
>SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11)
Length = 2297
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 780 YKYRGNRSPSADPRGSKRSGENGIIDNPNGPPLYGVK*KKLVFGSINSIRKPDVTAAAKG 601
+K++G + P G++G ID +GP G K K V SI+ PD+ +A G
Sbjct: 68 WKFKGPKMPKFKGPSFGGKGKSGDIDY-DGPDFDGPKVKANVEVPDASIKGPDIDGSAGG 126
Query: 600 SSSL 589
+L
Sbjct: 127 GINL 130
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 780 YKYRGNRSPSADPRGSKRSGENGIIDNPNGPPLYGVK*KKLVFGSINSIRKPDVTAAAKG 601
+K++G + P G++G ID +GP G K K V SI+ PD+ +A G
Sbjct: 309 WKFKGPKMPKFKGPSFGGKGKSGDIDY-DGPDFDGPKVKANVEVPDASIKGPDIDGSAGG 367
Query: 600 SSSL 589
+L
Sbjct: 368 GINL 371
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 780 YKYRGNRSPSADPRGSKRSGENGIIDNPNGPPLYGVK*KKLVFGSINSIRKPDVTAAAKG 601
+K++G + P G++G D +GP G K K V SI+ PD+ +A G
Sbjct: 476 WKFKGPKMPKFKGPSFGGKGKSGDSDY-DGPDFDGPKVKANVEVPDASIKGPDIDGSAGG 534
Query: 600 SSSL 589
S +L
Sbjct: 535 SINL 538
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 780 YKYRGNRSPSADPRGSKRSGENGIIDNPNGPPLYGVK*KKLVFGSINSIRKPDVTAAAKG 601
+K++G + P G++G ID +GP G K K V SI+ PD+ +A G
Sbjct: 990 WKFKGPKMPKFKGPSFGGKGKSGDIDY-DGPDFDGPKVKANVEVPDASIKGPDIDGSAGG 1048
Query: 600 SSSL 589
+L
Sbjct: 1049 GINL 1052
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 780 YKYRGNRSPSADPRGSKRSGENGIIDNPNGPPLYGVK*KKLVFGSINSIRKPDVTAAAKG 601
+K++G + P G++G ID +GP G K K V SI+ PD+ +A G
Sbjct: 1231 WKFKGPKMPKFKGPSFGGKGKSGDIDY-DGPDFDGPKVKANVEVPDASIKGPDIDGSAGG 1289
Query: 600 SSSL 589
+L
Sbjct: 1290 GINL 1293
>SB_32978| Best HMM Match : GATA (HMM E-Value=5.5)
Length = 93
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 294 TYCVDYIGRLQHFTRLPNVCGTCG 365
TYC +I RL+ + LP CG CG
Sbjct: 26 TYCKVHIQRLRKGSPLPVPCGVCG 49
>SB_39231| Best HMM Match : zf-C2H2 (HMM E-Value=3.4e-31)
Length = 505
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = -1
Query: 432 HHSGHTKEE--AALVDGFDNARTQDHKYHKH*EAL*SVEDVQYSPHNMCFSECTDHFEDP 259
H HT E+ + ++G D + KH + + P++ C + DP
Sbjct: 429 HQRSHTGEKPYSCPIEGCDKRYSNSSDRFKH-----TRTHYERKPYHCRIEGCEKRYTDP 483
Query: 258 KQSHQH*KTYH 226
+H KTYH
Sbjct: 484 SSLRKHLKTYH 494
>SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39)
Length = 1486
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 213 QIVADDTSFSADGIV-LDLRNDQYIH*STYCVDYIGRLQHFTRLPNVCGTCGPASA 377
QI++ GI+ DL+ + + Y + IG LQ RLP VCG P ++
Sbjct: 288 QIISAVQYLHQGGIIHRDLKVENLLLDEEYNIRIIGLLQDTVRLPCVCGPRNPRTS 343
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 341 KPCKVLKTSNIVHTICASVNVLIISKIQN--NPIST 240
+PC+V T ++ T C+SVN +K +N P ST
Sbjct: 203 RPCRVCSTGYVIATPCSSVNNTKCTKSRNTSKPSST 238
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 365 SCVRALSKPSTSAASSFVCPEWWKNVWPWSMMRRTNVSCTRRSL*PINSRP*ARCSIPPA 544
+C R KPS A+ CP +N P + RT+ CT N + A C+ PP+
Sbjct: 148 ACPRGTYKPSAGNATCVACP---RNSAPEA--DRTSCRCTSGYFRAANEKITADCTAPPS 202
>SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5)
Length = 260
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -1
Query: 369 QDHKYHKH*EAL*SVEDVQYSPHNMCFSECTDHFEDPKQSHQH*KTYHQPQFV 211
Q H++H+H L QYS +++ + H + +Q H+H + +HQ Q++
Sbjct: 64 QRHRHHQHHHQL------QYSVYSVSSASLQHHHQ--RQRHRHHQHHHQLQYI 108
>SB_4665| Best HMM Match : 7tm_2 (HMM E-Value=2.5e-11)
Length = 213
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 172 RKPFSSAHIKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQ 336
RKP + I+++RY L ++GL W+F + +E + +FN+LQ
Sbjct: 120 RKP---SKIRKIRYWAKACTLLTCILGLTWLFGVFYVNSETLFMAYFFTIFNSLQ 171
>SB_40049| Best HMM Match : LRR_1 (HMM E-Value=0.082)
Length = 380
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 126 NFKYVHLCILRNTCMSEAVFVGAYQRNALQIVADDTSFSA 245
+ ++ H+ LRN +++ +F+G +R +V+ D S SA
Sbjct: 18 HLQFNHIFSLRNGGLTDDIFLGVLRRGTASLVSLDLSASA 57
>SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09)
Length = 1338
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +1
Query: 64 VALIRESQRWYYMYSV-MSVLIILNMCIYVYCATLVCRKPFSSAHIKEM--RYKLWLMIR 234
+ I + + Y + + ++V + +N +YV + + + + R + + +R
Sbjct: 1079 ICWINDGRANLYFFGIPIAVSLCINAVLYVLTVKAIHASTDHAFLLNQSQNRRRFAIYVR 1138
Query: 235 LLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQG 339
+ L+G W+F ++ F +W V N LQG
Sbjct: 1139 IGSLLGFTWVFGFVAGF-GLDFLWYPFVVLNGLQG 1172
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,585,254
Number of Sequences: 59808
Number of extensions: 595982
Number of successful extensions: 1686
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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