Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31076
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 36 0.033
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 36 0.033
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 29 2.9
Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z93383-9|CAB07630.1| 281|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z48582-5|CAA88467.3| 377|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z83216-7|CAB05676.2| 320|Caenorhabditis elegans Hypothetical pr... 28 6.6
U46668-4|AAA93348.3| 951|Caenorhabditis elegans Nematode astaci... 28 6.6
AL132862-33|CAB70222.3| 308|Caenorhabditis elegans Hypothetical... 28 8.8
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
protein 2 protein.
Length = 1338
Score = 35.9 bits (79), Expect = 0.033
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 91 WYYMYSVMSVLIILNMCIYVYCATLVCRKPFSSAHIKEMRYKLWLM--IRLLVLMGLFWI 264
W ++ ++ V+I N+ I++ A V S K R WL LL L+G+ WI
Sbjct: 1042 WAFVAPII-VIIAANI-IFLLIALKVVLSVQSRDRTKWGRIIGWLKGSATLLCLLGITWI 1099
Query: 265 FEMISTF---TEAHIVWTILDVFNTLQGFLMFVVLVVLRPRVIKTI 393
F ++ T W I + N QG +FV+ VVL +V +I
Sbjct: 1100 FGFLTAVKGGTGTAFAW-IFTILNCTQGIFIFVLHVVLNEKVRASI 1144
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 35.9 bits (79), Expect = 0.033
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 91 WYYMYSVMSVLIILNMCIYVYCATLVCRKPFSSAHIKEMRYKLWLM--IRLLVLMGLFWI 264
W ++ ++ V+I N+ I++ A V S K R WL LL L+G+ WI
Sbjct: 1042 WAFVAPII-VIIAANI-IFLLIALKVVLSVQSRDRTKWGRIIGWLKGSATLLCLLGITWI 1099
Query: 265 FEMISTF---TEAHIVWTILDVFNTLQGFLMFVVLVVLRPRVIKTI 393
F ++ T W I + N QG +FV+ VVL +V +I
Sbjct: 1100 FGFLTAVKGGTGTAFAW-IFTILNCTQGIFIFVLHVVLNEKVRASI 1144
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 619 NIRFSDAINTPKYQLLSFDSIQRRAVRIVDNPI 717
N+R++ N+ YQ+++ D I R R+VDNP+
Sbjct: 441 NVRYTPVQNSTPYQVVTSDYI--RVGRVVDNPV 471
>Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical
protein F49E2.2b protein.
Length = 517
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 619 NIRFSDAINTPKYQLLSFDSIQRRAVRIVDNPI 717
N+R++ N+ YQ+++ D I R R+VDNP+
Sbjct: 382 NVRYTPVQNSTPYQVVTSDYI--RVGRVVDNPV 412
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 619 NIRFSDAINTPKYQLLSFDSIQRRAVRIVDNPI 717
N+R++ N+ YQ+++ D I R R+VDNP+
Sbjct: 387 NVRYTPVQNSTPYQVVTSDYI--RVGRVVDNPV 417
>Z93383-9|CAB07630.1| 281|Caenorhabditis elegans Hypothetical
protein F54B8.10 protein.
Length = 281
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 85 QRWYYMYSVMSVLIILNMCIYVYCAT 162
Q +Y++ S+L+ +CI+ +CAT
Sbjct: 177 QLFYFLIGAASILLFFRLCIWNHCAT 202
>Z48582-5|CAA88467.3| 377|Caenorhabditis elegans Hypothetical
protein F27E5.5 protein.
Length = 377
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 329 VLKTSNIVHTICASVNVLIISKIQNNPISTKRRIISH 219
V+ SNI T S+NV + + ++ P+ + I +H
Sbjct: 252 VMIVSNIFSTFTISINVYVYAAVRETPVEQRSAIATH 288
>Z83216-7|CAB05676.2| 320|Caenorhabditis elegans Hypothetical
protein C08F11.9 protein.
Length = 320
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 97 YMYSVMSVLIILNMCIYVYCATLVCRKPFSSAHIKEMRY-KLWLMIRLLVLMGLF 258
Y+Y+V ++ ++ +CI+V C ++ C + EM Y + ++ LL+L+ F
Sbjct: 153 YIYAVFAMKEVICLCIFVVCNSIGCSG--RKKLLAEMVYFSTFSVLNLLILIASF 205
>U46668-4|AAA93348.3| 951|Caenorhabditis elegans Nematode astacin
protease protein39 protein.
Length = 951
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 267 RNDQYIH*STYCVDYIGRLQHFTRLPNVCG 356
+N Y+H T+ + Y HF L +CG
Sbjct: 316 KNQTYLHWKTFLIYYTNSFFHFEILDRICG 345
>AL132862-33|CAB70222.3| 308|Caenorhabditis elegans Hypothetical
protein Y73F8A.3 protein.
Length = 308
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 100 MYSVMSVLIILNMCIYVYCATLVCRKPFSSAHIKEMRYKLWLMIRLLVLMGLFWI 264
+YS+++VL+ +++ Y YC L+ ++ + ++ + L L+IR +L G + I
Sbjct: 53 VYSILNVLVPIDIHTYSYCMFLIIKRGW-FVERSDLHFHL-LLIRCSMLGGSYGI 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,584,898
Number of Sequences: 27780
Number of extensions: 434822
Number of successful extensions: 1277
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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