Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31076
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   4.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   4.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   4.3  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   5.7  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   7.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 685 RRAVRIVDNPILTGSFGASGVCGGTSVPSVFVPYV 789
           R+A +  D+P +     A G+ G   + SVF PY+
Sbjct: 619 RKAHQEKDSPRIQTYIMALGMIGEPKILSVFEPYL 653


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 707 IIPFSPDRLEPLGSAEGLRFPLYLY 781
           I  F    L P G  EG+ F L+LY
Sbjct: 597 IFGFPGRLLLPRGKKEGMPFQLFLY 621


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 707 IIPFSPDRLEPLGSAEGLRFPLYLY 781
           I  F    L P G  EG+ F L+LY
Sbjct: 597 IFGFPGRLLLPRGKKEGMPFQLFLY 621


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/53 (20%), Positives = 27/53 (50%)
 Frame = -2

Query: 761 EVPPQTPEAPNDPVRMGLSTIRTALLCMESNERSWYLGVLIASENRMLQLPLK 603
           ++PP+T E   +  ++ L +I    L ++ ++    L  +   + R++ +P K
Sbjct: 315 DIPPETEEEEENDKKLDLDSIDMMQLPIQLDDGIDILDDVKCEDERVISIPDK 367


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 642 NSIRKPDVTAAAKGSSSLISYITHKY 565
           N I  PDV  AAK +  L   + H++
Sbjct: 73  NIIAIPDVVEAAKDADILTFVVPHQF 98


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 326 LKTSNIVHTICASVNVLIISKIQN 255
           +KT  I+  IC  V  L I   QN
Sbjct: 1   MKTILIISAICICVGALSIKDFQN 24


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -1

Query: 432 HHSGHTKEEAALVDGFDNARTQDHKYHKH 346
           H   HTKE     D  + A     K H+H
Sbjct: 138 HRRIHTKERPYKCDVCERAFEHSGKLHRH 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,524
Number of Sequences: 438
Number of extensions: 4932
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)