Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31076
(789 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g68570.1 68414.m07834 proton-dependent oligopeptide transport... 32 0.50
At5g67550.1 68418.m08518 expressed protein 31 0.87
At4g38360.2 68417.m05424 expressed protein contains Pfam profile... 31 1.2
At1g61370.1 68414.m06916 S-locus lectin protein kinase family pr... 30 2.0
At4g14400.3 68417.m02222 ankyrin repeat family protein contains ... 29 2.7
At4g14400.2 68417.m02221 ankyrin repeat family protein contains ... 29 2.7
At4g14400.1 68417.m02220 ankyrin repeat family protein contains ... 29 2.7
At5g09870.1 68418.m01141 cellulose synthase, catalytic subunit, ... 28 6.1
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 28 6.1
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 28 6.1
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 28 6.1
At5g64740.1 68418.m08141 cellulose synthase, catalytic subunit, ... 28 8.1
At5g41820.1 68418.m05092 geranylgeranyl transferase alpha subuni... 28 8.1
At5g24790.1 68418.m02927 expressed protein contains Pfam profile... 28 8.1
At1g61380.1 68414.m06917 S-locus protein kinase, putative simila... 28 8.1
>At1g68570.1 68414.m07834 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 596
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 88 RWYYMYSVMSVLIILNMCIYVYCATLVCRKPFSSAHIKE 204
R Y Y +++VL +N+ Y++CA + KP H KE
Sbjct: 539 RLEYFYWLITVLQAVNLVYYLWCAKIYTYKPVQVHHSKE 577
>At5g67550.1 68418.m08518 expressed protein
Length = 439
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 103 YSVMSVLIILNMCIYVYCATLVCRKPFSSAHIKEM-RYKLWLMIRLLVLMGL 255
Y+V VLII+ +C+ +Y A R+ SS + + RY L L + LL+ M L
Sbjct: 72 YAVAGVLIIVGICLGLYVAFSDKRRRVSSTRRRYLDRYYLPLFLLLLLFMFL 123
>At4g38360.2 68417.m05424 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 485
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 676 SIQRRAVRIVDNPILTGSFGASGV 747
S RR +R +D+P+L GSF SGV
Sbjct: 421 SPSRRVIRGIDDPLLNGSFSDSGV 444
>At1g61370.1 68414.m06916 S-locus lectin protein kinase family
protein contains Pfam domains, PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain, and
PF01453: Lectin (probable mannose binding)
Length = 814
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +2
Query: 368 CVRALSKPSTSAASSFVCP---EWWKNVWPWSMMRRTNVSC 481
C+R+ + P FV EW K W MRRTN+SC
Sbjct: 298 CIRS-NPPKCECLKGFVPKSDEEWNKRNWTGGCMRRTNLSC 337
>At4g14400.3 68417.m02222 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 604
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +1
Query: 196 IKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQGFLMFVVLVVLRP 375
+K + L L++ L+ M + ++F +I+ AH+ W ++ + GF +F + +L P
Sbjct: 503 LKSLHVALPLLLFSLLCMPVAFLFGVITAI--AHVKWLLVTISIISGGFFLFAIF-ILGP 559
Query: 376 RVI 384
V+
Sbjct: 560 HVM 562
>At4g14400.2 68417.m02221 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 604
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +1
Query: 196 IKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQGFLMFVVLVVLRP 375
+K + L L++ L+ M + ++F +I+ AH+ W ++ + GF +F + +L P
Sbjct: 503 LKSLHVALPLLLFSLLCMPVAFLFGVITAI--AHVKWLLVTISIISGGFFLFAIF-ILGP 559
Query: 376 RVI 384
V+
Sbjct: 560 HVM 562
>At4g14400.1 68417.m02220 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 670
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +1
Query: 196 IKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTILDVFNTLQGFLMFVVLVVLRP 375
+K + L L++ L+ M + ++F +I+ AH+ W ++ + GF +F + +L P
Sbjct: 569 LKSLHVALPLLLFSLLCMPVAFLFGVITAI--AHVKWLLVTISIISGGFFLFAIF-ILGP 625
Query: 376 RVI 384
V+
Sbjct: 626 HVM 628
>At5g09870.1 68418.m01141 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit (Ath-A), Arabidopsis thaliana
Length = 1069
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +1
Query: 178 PFSSAHIKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTI 312
P S+ I Y++ +++RL++L GLF+ + ++ +A+ +W I
Sbjct: 254 PIKSSKINP--YRMLIVLRLVIL-GLFFHYRILHPVNDAYALWLI 295
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 418 MSGMVEKCLAVVDDAEDECIVHTEVAMTD 504
+SG++EK VD A D C V ++A+TD
Sbjct: 560 LSGVLEKAQNEVDGATDVCPVSEKLAVTD 588
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 324 QHFTRLPNVCGTCGPASARYQNHPPARPL 410
QH RL N T P S+R H P+RP+
Sbjct: 507 QHHIRLDNHFDTSTPRSSRSTFHTPSRPI 535
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 324 QHFTRLPNVCGTCGPASARYQNHPPARPL 410
QH RL N T P S+R H P+RP+
Sbjct: 506 QHHIRLDNHFDTSTPRSSRSTFHTPSRPI 534
>At5g64740.1 68418.m08141 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit (Ath-A), Arabidopsis thaliana
Length = 1084
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +1
Query: 178 PFSSAHIKEMRYKLWLMIRLLVLMGLFWIFEMISTFTEAHIVWTI 312
P S+ I Y++ +++RL++L GLF+ + ++ +A+ +W I
Sbjct: 266 PIKSSKINP--YRMLIVLRLVIL-GLFFHYRILHPVKDAYALWLI 307
>At5g41820.1 68418.m05092 geranylgeranyl transferase alpha
subunit-related / RAB geranylgeranyltransferase alpha
subunit-related low similarity to SP|Q08602 [Rattus
norvegicus]
Length = 687
Score = 27.9 bits (59), Expect = 8.1
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = -2
Query: 734 PNDPVRMGLSTIRTALLCMESNERSWYLGVLIASENRMLQLPLK 603
P + +R L + +A+ +E + W+ + + + +++PL+
Sbjct: 211 PKETIRRELDYVHSAIFTLEEKQSGWFYYLWLLDQTVKMEIPLR 254
>At5g24790.1 68418.m02927 expressed protein contains Pfam profile
PF04654: Protein of unknown function, DUF599
Length = 246
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/50 (22%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 79 ESQRWYYMYSVMSVLIILNMCIYVYCATLVCRKPFSS-AHIKEMRYKLWL 225
E ++WY ++ + +++ +C ++Y + +V PFS+ I ++W+
Sbjct: 2 EWKKWYLDAILVPLALMMMICYHIYLSFMVRTNPFSTLLGINSHGRRIWI 51
>At1g61380.1 68414.m06917 S-locus protein kinase, putative similar
to KI domain interacting kinase 1 [Zea mays]
gi|2735017|gb|AAB93834; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 805
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 368 CVRALSKPSTSAASSFVCP---EWWKNVWPWSMMRRTNVSCTRRS 493
CVR+ P FV EW K W +RRT +SC +S
Sbjct: 293 CVRS-DPPKCECLKGFVPKSDEEWGKGNWTSGCVRRTKLSCQAKS 336
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,380,949
Number of Sequences: 28952
Number of extensions: 399997
Number of successful extensions: 1062
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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