Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31074
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0338 + 22479804-22480651,22480764-22482954                       29   3.1  
06_01_0335 + 2412766-2415655,2416108-2416208,2416871-2416895,241...    29   4.1  
08_02_0666 - 19823490-19823822,19823912-19824185,19824311-19826292     28   7.2  

>11_06_0338 + 22479804-22480651,22480764-22482954
          Length = 1012

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 472 VELISLLTRRLETWYSFIFSYELT 401
           VE + LL ++ E W SF +SYEL+
Sbjct: 403 VEQVRLLLKQFEYWLSFDYSYELS 426


>06_01_0335 +
           2412766-2415655,2416108-2416208,2416871-2416895,
           2416977-2417049,2417191-2417373,2418164-2418227,
           2418427-2418447,2418862-2418905,2420575-2420650,
           2421359-2421373
          Length = 1163

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 133 NFLRCTKKNVNWFFTTSQPVLC 68
           N LRCT+K    FF  S+P+ C
Sbjct: 621 NILRCTRKEYYEFFDPSKPIQC 642


>08_02_0666 - 19823490-19823822,19823912-19824185,19824311-19826292
          Length = 862

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -2

Query: 154 ERKIMVANF--LRCTKKNV-NWFFTTSQPVLCYEL 59
           ERKI+VANF  L CTK     W F+     L  +L
Sbjct: 58  ERKIIVANFLPLNCTKDEAGQWSFSRDDDALLMQL 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,445,062
Number of Sequences: 37544
Number of extensions: 317706
Number of successful extensions: 517
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)