Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31074
         (770 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.1  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    23   3.1  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   3.1  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    23   3.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   7.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.6  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 756 RSPFFK*ANL*AH*VSRRIFSAGRDSD 676
           +SP+FK ANL    ++  +F+  R+++
Sbjct: 471 KSPYFKEANLNTRMLNDNVFAFSRETE 497


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 493 LSHHYIIVELISLLT-RRLETWYSFIFSY 410
           + H+YI++ ++SLLT    E  YS  + Y
Sbjct: 1   MRHNYIVILILSLLTWTYAEELYSDKYDY 29


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 361 SNNSLIKNRVCFRLFFNCYNNVYLT 287
           SNN+ + N   +   +N YNN Y T
Sbjct: 83  SNNNSLSNNYNYNNNYNNYNNNYNT 107


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 493 LSHHYIIVELISLLT-RRLETWYSFIFSY 410
           + H+YI++ ++SLLT    E  YS  + Y
Sbjct: 1   MRHNYIVILILSLLTWTYAEELYSDKYDY 29


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 756 RSPFFK*ANL*AH*VSRRIFSAGRDSD 676
           +SP+FK ANL    ++  +F+  R+++
Sbjct: 471 KSPYFKEANLNTRMLNDNVFAFSRETE 497


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 357 IIHSSRIEYVFG 322
           ++H   +EYVFG
Sbjct: 494 VLHGDEVEYVFG 505


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 233 NNSVKHAHNSKY*Y*N 280
           NN+ K+ +N+KY Y N
Sbjct: 93  NNNYKYNYNNKYNYNN 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,472
Number of Sequences: 438
Number of extensions: 3862
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)