Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31073
         (822 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.6  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    23   3.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   3.4  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    23   4.5  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   6.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.0  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   6.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.0  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 588 NNCQKYFLCIDGHPRVLYCGGESAFDDLTST 680
           NN   Y   ++G+  ++Y   + +F  LTS+
Sbjct: 196 NNTWVYIADVEGYALIIYNNADDSFQRLTSS 226


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 366 DARNCSGFRNCVNGVGYDFV 425
           D++N  GF   V G+GYDF+
Sbjct: 251 DSQNEVGFYE-VEGIGYDFI 269


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 86  ILEAICLSKRLILCLCVNKGAKARQDHK 3
           I  A+CL++R I     N+  K +++HK
Sbjct: 41  IAHALCLTERQIKIWFQNRRMKWKKEHK 68


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 426 CPDGLAFNSETYRCEWPDEVADCDAE 503
           CPDGL   S+   C   D +   D +
Sbjct: 64  CPDGLKLLSDGLMCVEKDSIHSIDGD 89


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 501 QHRSRRLHQAIRSGRSQN*KPVRRDIQNRSLHRSR 397
           QH S R  +  R  R +N +  ++D Q   LH  +
Sbjct: 225 QHTSSRYSRERRCSRDRNREYRKKDRQYEKLHNEK 259


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
          protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 3  FVILTCFCAFVYTQTQ 50
          F++L  FCA  Y   Q
Sbjct: 3  FIVLVLFCAVAYVSAQ 18


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = -3

Query: 313 GCSEDRSRHGTSLGYWHGYTSKFTLG 236
           GC       G++L  W    +  TLG
Sbjct: 19  GCGPPEEETGSNLPVWEAAAASLTLG 44


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = -3

Query: 313 GCSEDRSRHGTSLGYWHGYTSKFTLG 236
           GC       G++L  W    +  TLG
Sbjct: 19  GCGPPEEETGSNLPVWEAAAASLTLG 44


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 315 PQPTELCPHQFGYF 356
           P  T+ CP QFG F
Sbjct: 138 PMDTQRCPLQFGSF 151


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = -3

Query: 313 GCSEDRSRHGTSLGYWHGYTSKFTLG 236
           GC       G++L  W    +  TLG
Sbjct: 19  GCGPPEEETGSNLPVWEAAAASLTLG 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,065
Number of Sequences: 438
Number of extensions: 5932
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)