Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31072
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 36 0.004
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 29 0.45
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 28 1.0
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 28 1.4
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 27 1.8
SPAC27F1.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.4
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 27 2.4
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.2
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 3.2
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 26 4.2
SPBC651.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.2
SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces ... 26 4.2
SPCC16A11.01 ||SPCC63.15|conserved fungal protein|Schizosaccharo... 26 5.6
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 26 5.6
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 25 7.4
SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces pom... 25 7.4
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.7
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 25 9.7
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 25 9.7
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 25 9.7
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 36.3 bits (80), Expect = 0.004
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
A H QCF C C +NLE F+ + G+ +C
Sbjct: 273 ASGKKLHPQCFKCDTCSQNLEHVGFYYREGKFYC 306
Score = 32.3 bits (70), Expect = 0.064
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 10 NNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 108
+ YHSQC+ C C L + +F P C+
Sbjct: 394 DGEYHSQCWTCGACNALLGDEGYFMIENTPICR 426
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 29.5 bits (63), Expect = 0.45
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +1
Query: 19 YHSQCFNCTVCKKNLEGQSFF---AKGGRPFCKTHA 117
+H CF CT C K LE GRP C + A
Sbjct: 40 WHKDCFCCTKCDKGLEHSDQMLVQTSDGRPVCSSCA 75
Score = 29.1 bits (62), Expect = 0.60
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 13 NNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
++YH +CF C C+K + +F FC
Sbjct: 95 DSYHRECFRCHDCRKQIIDSNFKRDNRTIFC 125
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 10 NNNYHSQCFNCTVCKKNLEGQSFFA 84
N+ Y QCF C V K+ LE + A
Sbjct: 551 NDTYFGQCFACAVVKRTLERNNITA 575
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 359 DVIDSPSTVEVHDKNYVDDIIKSETIINQDIITVKFTPVPPE 484
D + P TVE++ +N V D+I + + + I + PPE
Sbjct: 108 DALMPPPTVEINYRNEVLDVIMQQRVQRNENIDPEHKGFPPE 149
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFF 81
AL N YH +CF C C +L FF
Sbjct: 130 ALGNIYHLECFRCHDC-NSLVASKFF 154
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNL-EGQSFFAKGGRPFCKTH 114
ALN +H + F C++C S++ G+ +C H
Sbjct: 194 ALNKKFHIEHFTCSLCYTVFGPNDSYYEYEGKVYCHYH 231
>SPAC27F1.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 460 DRYYVLIYYS-FGFYYIVDVIFVVHLNS 380
++Y + ++ S F F YIV+ F++HLN+
Sbjct: 69 EKYNISLFDSTFVFGYIVNCFFIIHLNT 96
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 19 YHSQCFNCTVCKKNLEGQS 75
+HS CF C C K L+ S
Sbjct: 44 WHSDCFKCVNCNKKLDPSS 62
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 350 THHDVIDSPSTVEVHDKNYVDDIIKSETIINQDIITVKFT 469
T+H I SP+T D Y D+I S ++ + I V T
Sbjct: 185 TYHTPIASPTTSSNSDNEYTVDVITSSSLSSFVITNVDST 224
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 473 VPPE-FDSQMISPQLAKRSKTPIQYL 547
+PP + +ISPQ +RS+TPI+ L
Sbjct: 526 IPPSPLQNTVISPQPTRRSRTPIRSL 551
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 398 KNYVDDIIKSET---IINQDIITVKFTPVPPEFDSQMISPQLAKRSKTPIQYLKD 553
K ++D+ + + I ++D +K PEF + + Q KTP+Q KD
Sbjct: 435 KTQIEDLEEDQNKSKIASKDGTNLKEINSVPEFSDENVINQTGPAKKTPVQRRKD 489
>SPBC651.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 237
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 96 PTSLGEEALSFEVLFTHRAVEALTVVVIVER 4
P +GE ++S E +FTH VE++ + + +R
Sbjct: 104 PLVVGEASVSLEDIFTHGTVESVIPLFMKKR 134
>SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 639
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +2
Query: 371 SPSTVEVHDKNYVDDIIKSETIINQDIITVKFTPVPPEFDSQMISPQLAKRSKTPIQYLK 550
+PS+ E + V DI+ + + T+ P ++M++ +L +R K + K
Sbjct: 177 NPSSDEALINSRVQDIVNGLFSVIVTLGTIPIIRCPQGSAAEMVAQKLNQRLKDHLMNTK 236
Query: 551 DDFVDL 568
D FV +
Sbjct: 237 DAFVSV 242
>SPCC16A11.01 ||SPCC63.15|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 328
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 77 SSPREVGLS-VKHTPVKSPIKIIYNSDTVYSTTTFRPV 187
+S E G+S + T + P+ +YN D +TTT RPV
Sbjct: 291 ASATEPGVSNIPETRPERPV--VYNMDVSQTTTTTRPV 326
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 149 SDTVYSTTTFRPVSPLPITPP--AVGTPSPQRTRKLETPLH---FDGGLFSDIRSTDGKL 313
+D S++ R +S + ++ P A+G+P Q + +PLH FSD R D K
Sbjct: 464 NDLSRSSSYSRHLSHVSLSNPDFAIGSPMSQDSSNYSSPLHRRKASDSNFSDPRFDDLKY 523
Query: 314 LS 319
LS
Sbjct: 524 LS 525
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 25.4 bits (53), Expect = 7.4
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Frame = +2
Query: 326 TVDRVQRSTHHDVIDSPSTVE-------VHDKNYVDDIIKSETIINQDIITVKFTPVPPE 484
TVD + S V+ + S E V+DK Y I K++ + + + P
Sbjct: 285 TVDYICNSDASSVVSNLSDFEDCFDQFGVYDKEYEKKIEKTKRNFPKFQSSATYPPFSAH 344
Query: 485 FDSQMISPQLAKRSKTPIQYLKDDFVDLQSYKIVNSL 595
++ +PQ + K Q KDD L +++L
Sbjct: 345 HQARRNNPQGFRNVKKRFQLFKDDCTALTDSDFLDAL 381
>SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 357 WCVERCTLSTVTLLSNFPSVLLMSEN 280
WCV C+LS + L N S EN
Sbjct: 174 WCVGVCSLSLIEFLQNSKSRTFSLEN 199
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 182 PVSPLPITPPAVGTPSPQRTRKLETPL 262
P PLP PP P P+ E+PL
Sbjct: 131 PEEPLPGEPPLPNEPVPETNCHKESPL 157
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 529 FGPFGQLRTYHLGIE 485
FGPFGQL H+ I+
Sbjct: 343 FGPFGQLEQVHMPID 357
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 306 PSVLLMSENSPPSKWRGVS 250
P++LL +EN+ SKW VS
Sbjct: 740 PTILLKNENNFVSKWANVS 758
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 553 ILEILNWCFGPFGQLRTYHLGIEFRWDR 470
I E L W P G ++ +H+G+ + R
Sbjct: 129 ISEFLRWALMPPGYVKEWHVGVRVKSSR 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,738,375
Number of Sequences: 5004
Number of extensions: 58028
Number of successful extensions: 225
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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