Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31072
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 39 0.004
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 39 0.004
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 38 0.006
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 38 0.010
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 37 0.013
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 37 0.017
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 36 0.022
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 34 0.12
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 33 0.16
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 33 0.21
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 33 0.27
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 31 0.63
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 31 0.63
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 31 0.84
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 31 0.84
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 30 1.5
SB_18427| Best HMM Match : Peptidase_C54 (HMM E-Value=1.3) 30 1.9
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_31049| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 29 2.6
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 29 2.6
SB_12405| Best HMM Match : I-set (HMM E-Value=8.8e-21) 29 2.6
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 29 3.4
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_50345| Best HMM Match : Cadherin (HMM E-Value=0) 28 5.9
SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_10746| Best HMM Match : Cadherin (HMM E-Value=0) 28 5.9
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 28 7.8
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 28 7.8
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 28 7.8
SB_3045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLE-GQSFFAKGGRPFCK 108
AL N YH CF CT+C LE GQ F K + +CK
Sbjct: 23 ALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCK 58
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLE-GQSFFAKGGRPFCK 108
AL N YH CF CT+C LE GQ F K + +CK
Sbjct: 121 ALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCK 156
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 1 EALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
+A + N+H + F C C ++L GQ + A+GG+P C
Sbjct: 388 QAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHC 422
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 19 YHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTH 114
+H CF CTVC L +F K G +C H
Sbjct: 334 WHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRH 365
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 108
A+ +H+ CF C VC++ L F+A+G +CK
Sbjct: 26 AIGKRFHNACFRCVVCEERL-STDFYARGSELYCK 59
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 37.1 bits (82), Expect = 0.013
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 108
AL +H + F C C+ L Q+FF + G+P+C+
Sbjct: 296 ALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCE 330
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 108
AL+ +H + F C C F + G+PFC+
Sbjct: 355 ALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCR 389
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 36.7 bits (81), Expect = 0.017
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
A+N N+H F C C ++ G+ F +G +P C
Sbjct: 294 AMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVC 327
Score = 32.7 bits (71), Expect = 0.27
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 13 NNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
+N+H +CF C+ C ++L + F +G C
Sbjct: 540 SNFHKECFMCSRCGRSLASEGFVREGDELLC 570
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +1
Query: 1 EALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTHAR*KSNKNNLQLGHCLLD 168
E N +H CF C C + + F K FC + K +K G LL+
Sbjct: 417 EYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLE 472
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLE-GQSFFAKGGRPFCKTH 114
A N YH CF C CK+ L G+ F K G CK H
Sbjct: 179 AKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKLH 216
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 13 NNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 108
+ YHS+CF C C K L G F + GR C+
Sbjct: 254 STYHSECFTCHHCDKPLAGSPFTKQEGRNVCQ 285
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 19 YHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
+H +CF C C K L G+ F + G C
Sbjct: 317 FHRECFTCCKCNKPLAGEKFRIRDGEKIC 345
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 10 NNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
+ +H +CF C CK+ + + F + R C
Sbjct: 194 SKTFHDKCFICDECKQPIGSKQFIRRDERRLC 225
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +1
Query: 1 EALNNNYHSQCFNCTVCKKNL-EGQSFFAKGGRPFCK 108
+ L YH CF CT C L G F GR FC+
Sbjct: 723 KVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFCE 759
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 10 NNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 108
N +HS+CF C C+ L G++F + R CK
Sbjct: 18 NKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCK 50
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 19 YHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
YHS CF C+ C+K L G++F G C
Sbjct: 82 YHSDCFVCSRCRKPLAGKTFTEHEGSWVC 110
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 19 YHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTH 114
+H+ CF CT CK+ L +F K + +C H
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYCGRH 134
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 25 SQCFNCTVCKKNLEGQSFFAKGGRPFC 105
++CF+C C K L G F K G +C
Sbjct: 228 NECFSCCTCGKALLGLPFLPKSGEIYC 254
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTH 114
AL +H + F C C+K G ++ + G +C+TH
Sbjct: 95 ALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETH 131
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +1
Query: 1 EALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPF 102
+A+ N+H CF C +C L F G +
Sbjct: 27 KAMQANWHPDCFRCEICNDCLADTGFVKNAGSTY 60
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 108
A+ +H C C C K+L+ + K G +CK
Sbjct: 25 AIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCK 59
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNL-EGQSFFAKGGRPFC 105
A NN YH +CF C C+K L G++F + C
Sbjct: 97 ARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLC 131
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 32.7 bits (71), Expect = 0.27
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 13 NNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
+N+H +CF C+ C ++L + F +G C
Sbjct: 128 SNFHKECFMCSRCGRSLASEGFVREGDELLC 158
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +1
Query: 1 EALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTHAR*KSNKNNLQLGHCLLD 168
E N +H CF C C + + F K FC + K +K G LL+
Sbjct: 5 EYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLE 60
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 19 YHSQCFNCTVCKKNL-EGQSFFAKGGRPFCK 108
YH CF C CK+ L G+ F +G R +CK
Sbjct: 331 YHVNCFACDRCKRMLATGEYFGMRGIRIYCK 361
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNL-EGQSFFAKGGRPFCK 108
A N YH CF C C + L G F + FCK
Sbjct: 100 ARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFCK 135
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 7 LNNNYHSQCFNCTVCKKNLEGQSFFAKG 90
L +H +CF CT C K+L+ + +G
Sbjct: 28 LGMTFHKRCFTCTTCNKSLDSTTVADRG 55
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 31.1 bits (67), Expect = 0.84
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +2
Query: 110 HTPVKSPIKIIYNSDT-VYSTTTFRPVSPLPITP----PAVGTPSPQRTRKLETPLH 265
++P K I + D+ V + RPV+P P+TP P TP P TR +E H
Sbjct: 742 NSPNTKATKPIASEDSSVVAMPAARPVTPKPVTPKPVTPKPVTPKPVTTRPVEAVRH 798
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 10 NNNYHSQCFNCTVCKKNLEGQSFFAKGGR 96
N+ +H +CF+C C+K L+ + + G+
Sbjct: 61 NHKFHKKCFSCKDCRKKLDSTNAASHDGK 89
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 NYHSQCFNCTVCKKNLE 66
N+H CFNC C K L+
Sbjct: 237 NWHKSCFNCYKCHKKLD 253
>SB_18427| Best HMM Match : Peptidase_C54 (HMM E-Value=1.3)
Length = 535
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 164 STTTFRPVSPLPITPPAVGTPSPQRTRKLETPLH 265
+T+T P + PP V TP+PQR R+ H
Sbjct: 230 NTSTITPQAAPNTNPPPVATPAPQRRRRRRRRRH 263
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 108
AL +H CF+CT C L + G+P+C+
Sbjct: 104 ALEKQWHLWCFSCTKC-HCLLSLEYMGMDGKPYCE 137
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +2
Query: 218 GTPSPQRTRKLETPLHFDGGLFSDIRSTDGKLLSKVTVDRVQRSTHHDVIDSPSTVEVHD 397
GTP P T E+ +DGG +S + +G + + R + + + I EV
Sbjct: 2085 GTPVPAVTFHRESEQIYDGGRYSIVEEENGLFVLTIRNTRPEDAGEYQCIAVNGAGEVTS 2144
Query: 398 KNYVDDIIKSETIINQDI 451
K Y+ ++ E I Q I
Sbjct: 2145 KGYLH--VEEELTIPQFI 2160
>SB_31049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 164 STTTFRPVSPLPITPPAVGTPSPQRTRK 247
+T+T P + PP V TP+PQR R+
Sbjct: 57 NTSTITPQAAPNTNPPPVATPAPQRRRR 84
>SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 164 STTTFRPVSPLPITPPAVGTPSPQRTRK 247
+T+T P + PP V TP+PQR R+
Sbjct: 29 NTSTITPQAAPNTNPPPVATPAPQRRRR 56
>SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 785
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 164 STTTFRPVSPLPITPPAVGTPSPQRTRK 247
+T+T P + PP V TP+PQR R+
Sbjct: 231 NTSTITPQAAPNTNPPPVATPAPQRRRR 258
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 4 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 105
A++ +H + F C C K L +F + +P+C
Sbjct: 39 AMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 72
>SB_12405| Best HMM Match : I-set (HMM E-Value=8.8e-21)
Length = 198
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +2
Query: 218 GTPSPQRTRKLETPLHFDGGLFSDIRSTDGKLLSKVTVDRVQRSTHHDVIDSPSTVEVHD 397
GTP P T E+ +DGG +S + +G + + R + + + I EV
Sbjct: 13 GTPVPAVTFHRESEQIYDGGRYSIVEEENGLFVLTIRNTRPEDAGEYQCIAVNGAGEVTS 72
Query: 398 KNYVDDIIKSETIINQDI 451
K Y+ ++ E I Q I
Sbjct: 73 KGYLH--VEEELTIPQFI 88
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 164 STTTFRPVSPLPITPPAVGTPSPQRTRKLETPLHFDGGLFSDIRSTDGKLLSK 322
STTT P P T P TPS T D L S+++ LL K
Sbjct: 309 STTTTSPTKTTPTTTPPTTTPSTTTTSTTTKQTSKDASLESELKDILPILLEK 361
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 10 NNNYHSQCFNCTVCKKNLE 66
N+ +H +CF+C C+K L+
Sbjct: 3 NHKFHKKCFSCKDCRKKLD 21
>SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +2
Query: 191 PLPITPPAVGTPSPQRTRKLETPLHFDGGLFSDIRSTDGKLLSKVTVDRVQRSTHHDVID 370
PL PP+VG PSP + P S + G +T D+ + D+I+
Sbjct: 472 PLNGQPPSVGIPSPMMFNNDQPPNRLPTPTSSQTQENIGLSNGTLTQDKTKPGCSEDMIN 531
Query: 371 SPSTVEVHDKNYVDDI 418
++ +V +K Y+ ++
Sbjct: 532 DLNSKKV-NKGYLCEL 546
>SB_50345| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1021
Score = 28.3 bits (60), Expect = 5.9
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = +2
Query: 275 GLFSDIRSTDGKLLSKVTVDR--VQRSTHHDVIDSPSTVEVHDKNYVDDIIKSET-IINQ 445
G+F +I + G L +K+ ++R + S D+ V D V I +E +++
Sbjct: 63 GIF-EINAATGVLRTKILLNREKLPPSAQGDIFQIQIKVTT-DTGGVSATIPTEVRVLDI 120
Query: 446 DIITVKFTPVPPEFDSQMISPQLAKRSKTPIQYLKDDFV---DLQSYKIV 586
+ + KF P +F+ IS +RSK P+Q D + +Q Y+IV
Sbjct: 121 NDHSPKF---PQDFEELQISESAPERSKFPLQRALDADIGNNSIQEYRIV 167
>SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +2
Query: 164 STTTFRPVSPL--PITPPAVGTPSPQR 238
++TT P+ PL PI+PP TP P++
Sbjct: 475 ASTTSDPIQPLCGPISPPQATTPQPRQ 501
>SB_10746| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 336
Score = 28.3 bits (60), Expect = 5.9
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = +2
Query: 275 GLFSDIRSTDGKLLSKVTVDR--VQRSTHHDVIDSPSTVEVHDKNYVDDIIKSET-IINQ 445
G+F +I + G L +K+ ++R + S D+ V D V I +E +++
Sbjct: 63 GIF-EINAATGVLRTKILLNREKLPPSAQGDIFQIQIKVTT-DTGGVSATIPTEVRVLDI 120
Query: 446 DIITVKFTPVPPEFDSQMISPQLAKRSKTPIQYLKDDFV---DLQSYKIV 586
+ + KF P +F+ IS +RSK P+Q D + +Q Y+IV
Sbjct: 121 NDHSPKF---PQDFEELQISESAPERSKFPLQRALDADIGNNSIQEYRIV 167
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 191 PLPITPPAVGTPSPQRTRKLETP 259
P P TPP+V + PQ T +TP
Sbjct: 757 PRPSTPPSVSSAPPQTTNFCDTP 779
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 416 IIKSETIINQDIITVKFTPVPPEFDSQMISPQL 514
++K++ + D+I+ KF P+ E +S IS QL
Sbjct: 275 VVKAKKLDYDDVISPKFEPLKKEDNSNKISTQL 307
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 188 SPLP-ITPPAVGTPSPQRTRKLETPL 262
SP P +PP TPSP+ TR +PL
Sbjct: 40 SPTPRSSPPKAATPSPKITRSWSSPL 65
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +2
Query: 107 KHTPVKSPIKIIYNSDTVYSTTTFRPVSPLPITPPAVG-------TPSPQR-TRKLETPL 262
K P + Y+S T T T P+SP P ++G T S T + T
Sbjct: 1119 KAVPKSAQAPSPYSSSTTKMTGTPSPMSPTPSPSGSIGIVGSVGSTGSNDAITTRSRTSK 1178
Query: 263 HFDGGLFSDIRSTDGKLLSKVTVDRVQRSTH 355
H G + S + +T + + +TV + + H
Sbjct: 1179 HASGAMASPVNTTIPQKIHTMTVQHLNYTNH 1209
>SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +2
Query: 368 DSPSTVEVHDKNYVDDIIKSETIINQDIITVKFTPVPPEFDSQM--ISPQLAKRS--KTP 535
++ + V +K + K+E I+ QD+++ K P+ D++ IS Q +R+ KTP
Sbjct: 431 ENETKYSVIEKGSILHNFKTEAIVEQDVVSAKQYPMTESSDARRDEISHQAEERTPHKTP 490
Query: 536 -IQYLKDDFVDLQSYKIVNS 592
L D Q K+ S
Sbjct: 491 TASELAAGITDAQEGKVKGS 510
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 104 VKHTPVKSPIKIIYNSDTVYSTTTFRPVSPLPITPPAVGTPSPQRTRKLE 253
+K +P +PIK ++ + + + P+ P P T P +PS T ++
Sbjct: 1297 IKPSPSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTSTTPIK 1346
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 155 TVYSTTTFRPVSP-LPITPPAVGTPSP 232
TV+ TTT P+SP P+TP V P
Sbjct: 562 TVFVTTTVAPLSPAAPLTPDTVSITKP 588
>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
Length = 708
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 125 SPIKIIYNSDTVYSTTTFRPVSPLPITPPAVGTPSPQRTRKLETPLHFDGGLFSDIRSTD 304
+P+ + N+ T Y T P PLP PA+ + L++ H D G+ I
Sbjct: 381 TPVSPVLNASTQYCPTV--PNKPLPSFLPALQS---SMFHSLQSLPHSDAGILQQILPIL 435
Query: 305 GKLLSKVTV 331
G+L K+ +
Sbjct: 436 GRLEYKIDI 444
>SB_3045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 472 RSEFDRYYVLIYYSFGFYYIVDVIFVVHLNSTRGVD 365
RS++ RY + +++ Y V + V H +STRG+D
Sbjct: 316 RSQYTRYDTVTVHAYTRYDTVTIHAVWHDHSTRGMD 351
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,825,661
Number of Sequences: 59808
Number of extensions: 447409
Number of successful extensions: 1656
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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