Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31069
         (780 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF434174-1|ABO26294.1|  866|Drosophila melanogaster AGO3 protein.      30   3.1  
EF211827-1|ABO27430.1|  867|Drosophila melanogaster Argonaute3 p...    30   3.1  
AE014296-3774|ABI31274.1|  732|Drosophila melanogaster CG40300-P...    30   3.1  
AE014296-3773|ABI31275.1|  732|Drosophila melanogaster CG40300-P...    30   3.1  
AE014296-3772|EAA45981.2|  732|Drosophila melanogaster CG40300-P...    30   3.1  
BT001388-1|AAN71143.1|  457|Drosophila melanogaster GH04863p pro...    29   7.2  
AE014296-802|AAN11595.1|  457|Drosophila melanogaster CG14997-PB...    29   7.2  
AE014296-801|AAF47867.1|  457|Drosophila melanogaster CG14997-PA...    29   7.2  

>EF434174-1|ABO26294.1|  866|Drosophila melanogaster AGO3 protein.
          Length = 866

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = -2

Query: 572 SPSSSNPTLATKGSTSELTHRHSPLSFSPDLLSGSRFRSGGRFCEALLL 426
           S S  N T  TKG  SE     + L F PDL+ GS+  S   +C  L L
Sbjct: 90  SESKENITKKTKGPESEAIASENGLFF-PDLIYGSKGSSVNIYCNYLKL 137


>EF211827-1|ABO27430.1|  867|Drosophila melanogaster Argonaute3
           protein.
          Length = 867

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = -2

Query: 572 SPSSSNPTLATKGSTSELTHRHSPLSFSPDLLSGSRFRSGGRFCEALLL 426
           S S  N T  TKG  SE     + L F PDL+ GS+  S   +C  L L
Sbjct: 90  SESKENITKKTKGPESEAIASENGLFF-PDLIYGSKGSSVNIYCNYLKL 137


>AE014296-3774|ABI31274.1|  732|Drosophila melanogaster CG40300-PC,
           isoform C protein.
          Length = 732

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = -2

Query: 572 SPSSSNPTLATKGSTSELTHRHSPLSFSPDLLSGSRFRSGGRFCEALLL 426
           S S  N T  TKG  SE     + L F PDL+ GS+  S   +C  L L
Sbjct: 90  SESKENITKKTKGPESEAIASENGLFF-PDLIYGSKGSSVNIYCNYLKL 137


>AE014296-3773|ABI31275.1|  732|Drosophila melanogaster CG40300-PB,
           isoform B protein.
          Length = 732

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = -2

Query: 572 SPSSSNPTLATKGSTSELTHRHSPLSFSPDLLSGSRFRSGGRFCEALLL 426
           S S  N T  TKG  SE     + L F PDL+ GS+  S   +C  L L
Sbjct: 90  SESKENITKKTKGPESEAIASENGLFF-PDLIYGSKGSSVNIYCNYLKL 137


>AE014296-3772|EAA45981.2|  732|Drosophila melanogaster CG40300-PA,
           isoform A protein.
          Length = 732

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = -2

Query: 572 SPSSSNPTLATKGSTSELTHRHSPLSFSPDLLSGSRFRSGGRFCEALLL 426
           S S  N T  TKG  SE     + L F PDL+ GS+  S   +C  L L
Sbjct: 90  SESKENITKKTKGPESEAIASENGLFF-PDLIYGSKGSSVNIYCNYLKL 137


>BT001388-1|AAN71143.1|  457|Drosophila melanogaster GH04863p
           protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 518 THRHSPLSFSPDLLSGSRFRSGGRFCEALLLIG 420
           TH H+P +FS   LS SR     + C+ L++ G
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQVLVVGG 51


>AE014296-802|AAN11595.1|  457|Drosophila melanogaster CG14997-PB,
           isoform B protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 518 THRHSPLSFSPDLLSGSRFRSGGRFCEALLLIG 420
           TH H+P +FS   LS SR     + C+ L++ G
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQVLVVGG 51


>AE014296-801|AAF47867.1|  457|Drosophila melanogaster CG14997-PA,
           isoform A protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 518 THRHSPLSFSPDLLSGSRFRSGGRFCEALLLIG 420
           TH H+P +FS   LS SR     + C+ L++ G
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQVLVVGG 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,713,665
Number of Sequences: 53049
Number of extensions: 517053
Number of successful extensions: 1023
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)