Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31061
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     27   0.16 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    27   0.16 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           27   0.16 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   6.0  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   8.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.0  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 709 PFPHQRHPLC--L*TPPTC*IPICLASSKCSRVCGITPSVAATTNIAPSICA 560
           P  H   P+C  L T P    P+  +S+    +  ITP+V    ++  S+C+
Sbjct: 104 PILHDTQPMCESLNTQP----PVTSSSNILQNLADITPNVTPNCDVKSSVCS 151


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 709 PFPHQRHPLC--L*TPPTC*IPICLASSKCSRVCGITPSVAATTNIAPSICA 560
           P  H   P+C  L T P    P+  +S+    +  ITP+V    ++  S+C+
Sbjct: 104 PILHDTQPMCESLNTQP----PVTSSSNILQNLADITPNVTPNCDVKSSVCS 151


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 709 PFPHQRHPLC--L*TPPTC*IPICLASSKCSRVCGITPSVAATTNIAPSICA 560
           P  H   P+C  L T P    P+  +S+    +  ITP+V    ++  S+C+
Sbjct: 104 PILHDTQPMCESLNTQP----PVTSSSNILQNLADITPNVTPNCDVKSSVCS 151


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 57  YFTISTFIYFF 25
           YF ISTF YFF
Sbjct: 240 YFFISTFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 57  YFTISTFIYFF 25
           YF ISTF YFF
Sbjct: 236 YFFISTFFYFF 246


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 252 IILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTL 356
           ++  R+Y + ++ ERT     VG  G V H   +L
Sbjct: 196 VVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSL 230


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 385 ISIW--HRKKVMQILTMPPRRRLEVSLLMWL 471
           ++IW   R ++      PP+ R +V +L+W+
Sbjct: 16  LNIWVPQRLRIRHHGDKPPQERPKVPVLVWI 46


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 73  LIFVWIFYNKYIHLFF 26
           L+ V I+Y  Y+HL F
Sbjct: 253 LLLVCIYYFYYMHLLF 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,306
Number of Sequences: 336
Number of extensions: 4069
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)