Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31061
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 213 1e-55
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 213 1e-55
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 213 1e-55
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 171 3e-43
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 171 3e-43
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 85 5e-17
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 85 5e-17
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 85 5e-17
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 79 4e-15
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 73 2e-13
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 62 3e-10
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 52 4e-07
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 45 7e-05
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 45 7e-05
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 42 6e-04
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 41 0.001
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.16
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.16
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 30 1.5
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 29 2.7
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 28 6.2
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 28 6.2
AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine re... 28 6.2
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 213 bits (520), Expect = 1e-55
Identities = 99/140 (70%), Positives = 116/140 (82%), Gaps = 3/140 (2%)
Frame = +3
Query: 246 LSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYA 416
+S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y
Sbjct: 26 VSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 85
Query: 417 DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAA 596
DIDNAPEEKARGITIN H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAA
Sbjct: 86 DIDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 145
Query: 597 TDGVMPQTREHLLLAKQIGI 656
TDG MPQTREHLLLA+Q+G+
Sbjct: 146 TDGPMPQTREHLLLARQVGV 165
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 667 VVFINKVDAA-DEEMVELVEMEIRE 738
VVF+NKVD D E ELVEM+IRE
Sbjct: 171 VVFMNKVDEVPDAETRELVEMDIRE 195
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 213 bits (520), Expect = 1e-55
Identities = 99/140 (70%), Positives = 116/140 (82%), Gaps = 3/140 (2%)
Frame = +3
Query: 246 LSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYA 416
+S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y
Sbjct: 27 VSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86
Query: 417 DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAA 596
DIDNAPEEKARGITIN H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAA
Sbjct: 87 DIDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 146
Query: 597 TDGVMPQTREHLLLAKQIGI 656
TDG MPQTREHLLLA+Q+G+
Sbjct: 147 TDGPMPQTREHLLLARQVGV 166
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 667 VVFINKVDAA-DEEMVELVEMEIRE 738
VVF+NKVD D E ELVEM+IRE
Sbjct: 172 VVFMNKVDEVPDAETRELVEMDIRE 196
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 213 bits (520), Expect = 1e-55
Identities = 99/140 (70%), Positives = 116/140 (82%), Gaps = 3/140 (2%)
Frame = +3
Query: 246 LSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYA 416
+S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y
Sbjct: 27 VSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86
Query: 417 DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAA 596
DIDNAPEEKARGITIN H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAA
Sbjct: 87 DIDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 146
Query: 597 TDGVMPQTREHLLLAKQIGI 656
TDG MPQTREHLLLA+Q+G+
Sbjct: 147 TDGPMPQTREHLLLARQVGV 166
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 667 VVFINKVDAA-DEEMVELVEMEIRE 738
VVF+NKVD D E ELVEM+IRE
Sbjct: 172 VVFMNKVDEVPDAETRELVEMDIRE 196
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 171 bits (417), Expect = 3e-43
Identities = 76/122 (62%), Positives = 99/122 (81%)
Frame = +3
Query: 300 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 479
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH+
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIG 102
Query: 480 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQ 659
Y++ R Y HTDCPGH+D+IKNMI GT+QMD A+LV+AATDGVM QT+EHL+LAKQ+G++
Sbjct: 103 YESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAKQVGVK 162
Query: 660 HV 665
++
Sbjct: 163 NM 164
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 652 VFNMWVVFINKVDAADEEMVELVEMEIRELMT 747
V NM +FINK D +E+ ++LVEME REL++
Sbjct: 161 VKNM-AIFINKADLVEEDDLDLVEMEARELLS 191
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 171 bits (417), Expect = 3e-43
Identities = 76/122 (62%), Positives = 99/122 (81%)
Frame = +3
Query: 300 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 479
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH+
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIG 102
Query: 480 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQ 659
Y++ R Y HTDCPGH+D+IKNMI GT+QMD A+LV+AATDGVM QT+EHL+LAKQ+G++
Sbjct: 103 YESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAKQVGVK 162
Query: 660 HV 665
++
Sbjct: 163 NM 164
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 652 VFNMWVVFINKVDAADEEMVELVEMEIRELMT 747
V NM +FINK D +E+ ++LVEME REL++
Sbjct: 161 VKNM-AIFINKADLVEEDDLDLVEMEARELLS 191
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 85.0 bits (201), Expect = 5e-17
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 22/146 (15%)
Frame = +3
Query: 294 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 428
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 429 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 608
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 609 MP-------QTREHLLLAKQIGIQHV 665
QTREH LLA+ +G++ +
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQL 148
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 85.0 bits (201), Expect = 5e-17
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 22/146 (15%)
Frame = +3
Query: 294 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 428
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 429 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 608
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 609 MP-------QTREHLLLAKQIGIQHV 665
QTREH LLA+ +G++ +
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQL 148
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 85.0 bits (201), Expect = 5e-17
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 22/146 (15%)
Frame = +3
Query: 294 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 428
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 429 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 608
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 609 MP-------QTREHLLLAKQIGIQHV 665
QTREH LLA+ +G++ +
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQL 148
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 80.6 bits (190), Expect = 1e-15
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 23/146 (15%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKGYAD------IDNAPEEKA 446
N+ +GHVD GK+TL + L ++ A + G A +D EE+
Sbjct: 172 NLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 231
Query: 447 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP---- 614
RG+T+++ ++T R D PGH D+I NMITGT+Q D AILVV AT G
Sbjct: 232 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFE 291
Query: 615 ---QTREHLLLAKQIGI-QHVGGVHK 680
QT+EH LL + +G+ Q + V+K
Sbjct: 292 NGGQTKEHALLLRSLGVTQLIVAVNK 317
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 80.6 bits (190), Expect = 1e-15
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 23/146 (15%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKGYAD------IDNAPEEKA 446
N+ +GHVD GK+TL + L ++ A + G A +D EE+
Sbjct: 190 NLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 249
Query: 447 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP---- 614
RG+T+++ ++T R D PGH D+I NMITGT+Q D AILVV AT G
Sbjct: 250 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFE 309
Query: 615 ---QTREHLLLAKQIGI-QHVGGVHK 680
QT+EH LL + +G+ Q + V+K
Sbjct: 310 NGGQTKEHALLLRSLGVTQLIVAVNK 335
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 78.6 bits (185), Expect = 4e-15
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 22/144 (15%)
Frame = +3
Query: 300 KPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNL------AQKKGYAD------IDNAP 434
K H N+ +GHVD GK+T+ + T ++ L A++KG +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 435 EEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP 614
EE+ +G T+ V ++TE+RH+ D PGH ++ NMI G Q D A+LV++A G
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFE 226
Query: 615 -------QTREHLLLAKQIGIQHV 665
QTREH +L K G++H+
Sbjct: 227 TGFDRGGQTREHSMLVKTAGVKHL 250
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 73.3 bits (172), Expect = 2e-13
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 15/115 (13%)
Frame = +3
Query: 294 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 428
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 429 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVA 593
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+LVVA
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/123 (31%), Positives = 59/123 (47%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 491
N G + HVDHGK+TL + ++ + QK+ +D E+ RGIT+ +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQM---LDKLQVERERGITVKAQTAALRHR 100
Query: 492 QRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVGG 671
D PGH D+ + A DG +L+VAA GV QT + LA + IQ +
Sbjct: 101 GYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTIANFWLAFEKNIQIIPV 160
Query: 672 VHK 680
++K
Sbjct: 161 INK 163
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQT- 488
N+G +GHVD GKTTLT I ++ S A +A GI N + + T
Sbjct: 15 NLGILGHVDSGKTTLTRRIAELGSTS--------AFDAHATSTTTDGIRRNTLDLGFSTM 66
Query: 489 ---EQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQ 647
R DCPGH+ I+ ++ + D AI+++ G+ PQT EHLLLA +
Sbjct: 67 TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASK 122
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQK--KGYADIDNAPEEKARGITINVAHVEYQ 485
N+G I HVD GKTT+T + + +++A KG D E+ RGIT+ A V
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITVQSAAVNLD 86
Query: 486 TEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQT 620
+ D PGH D+ + +DG ++V+ + GV PQT
Sbjct: 87 WKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQT 131
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 56.0 bits (129), Expect = 3e-08
Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYADI-------DNAPEEKAR 449
N+GTIGHV HGK+TL A + V + + N+ K GYA+ P
Sbjct: 42 NIGTIGHVAHGKSTLVKAFSGVHTVKFKRELERNITIKLGYANAKIYRCSNQECPRPGCY 101
Query: 450 GITINVAHVEYQTEQ----------RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAAT 599
+ + E+ RH DCPGH + M+ G A MD A L+VA
Sbjct: 102 RSAGSSTPDRFPCERAGCGGEFTCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGN 161
Query: 600 DGV-MPQTREHLLLAKQIGIQHV 665
+ PQT EHL + + + H+
Sbjct: 162 EPCPQPQTSEHLAAVEIMQLNHL 184
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 55.2 bits (127), Expect = 5e-08
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGYADI----DNAPEEKARGITINVAHV 476
N+G H+D GKTT+T I ++ + + +G D+ D E+ RGITI A
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSAAT 105
Query: 477 EYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQT 620
+ D PGH D+ + +DGA+LV+ GV QT
Sbjct: 106 YVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQT 153
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/103 (26%), Positives = 49/103 (47%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 491
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE 81
Query: 492 QRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQT 620
D PGH D+ + + D A+L++ +G+ QT
Sbjct: 82 PLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQT 124
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/103 (26%), Positives = 49/103 (47%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 491
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE 81
Query: 492 QRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQT 620
D PGH D+ + + D A+L++ +G+ QT
Sbjct: 82 PLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQT 124
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 52.0 bits (119), Expect = 4e-07
Identities = 45/136 (33%), Positives = 58/136 (42%)
Frame = +3
Query: 273 AEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG 452
A + ER P + +GHVDHGKTTL A+ S + + G
Sbjct: 147 ASPKDLERRPPIVTI--MGHVDHGKTTLLDAMRN--SQIAAGEFGGITQ----------- 191
Query: 453 ITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHL 632
I VE T+ R D PGHA + G D +LVVAA DGV QT + +
Sbjct: 192 -HIGAFSVEL-TKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQSI 249
Query: 633 LLAKQIGIQHVGGVHK 680
AK +Q V V+K
Sbjct: 250 KFAKDANVQLVVAVNK 265
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 44.8 bits (101), Expect = 7e-05
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Frame = +3
Query: 303 PHC--NVGTIGHVDHGKTT-LTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIN--- 464
PH NV GH+ HGKTT L + + + A+ D EK RG +I
Sbjct: 129 PHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQP 188
Query: 465 VAHVEYQTEQRHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLL 638
V+ V + + Y D PGH ++ M DG +++V A +GVM T +
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRH 248
Query: 639 AKQ 647
A Q
Sbjct: 249 AIQ 251
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 44.8 bits (101), Expect = 7e-05
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Frame = +3
Query: 303 PHC--NVGTIGHVDHGKTT-LTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIN--- 464
PH NV GH+ HGKTT L + + + A+ D EK RG +I
Sbjct: 4 PHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQP 63
Query: 465 VAHVEYQTEQRHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLL 638
V+ V + + Y D PGH ++ M DG +++V A +GVM T +
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRH 123
Query: 639 AKQ 647
A Q
Sbjct: 124 AIQ 126
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +3
Query: 312 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQT- 488
N+G +GHVD GKTTLT I ++ S A +A GI N + + T
Sbjct: 15 NLGILGHVDSGKTTLTRRIAELGST--------SAFDAHATSTTTDGIRRNTLDLGFSTM 66
Query: 489 ---EQRHYGHTDCPGHADYIKNMITGTAQMDGAILV 587
R DCPGH+ I+ ++ + D AI++
Sbjct: 67 TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVI 102
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Frame = +3
Query: 324 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE--YQTEQR 497
+GHVD GKT + I + +++ + G A E A I V Q + +
Sbjct: 490 LGHVDTGKTKMLDTIRR--TNVQQGEAGGITQQIGATEVPAEAIKERCRQVRGFLQDQMK 547
Query: 498 HYGHT--DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLL 638
G D PGH + G++ D AILVV G+ PQT E L L
Sbjct: 548 IPGFLIIDTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQTIESLKL 596
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 279 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 458
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 459 I 461
I
Sbjct: 70 I 70
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 513 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQT 620
D PGH D+ + DGA++VV GV QT
Sbjct: 116 DSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQT 151
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 279 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 458
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 459 I 461
I
Sbjct: 70 I 70
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 513 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQT 620
D PGH D+ + DGA++VV GV QT
Sbjct: 116 DSPGHVDFSSEVTAALGVTDGALVVVDCVSGVCVQT 151
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 294 RTKPHCNVGTIGHVDHGKTTLT 359
+ K H N+ IGHVD GK+T T
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTT 24
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical protein
F21G4.2 protein.
Length = 1573
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 279 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 380
KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1352 KQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 279 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 380
KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1352 KQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 513 DCPGHADYIKNMITGTAQMDG--AILVVAATDGVMPQTREHLLLAKQIGI 656
D G A Y K I G A LVVAA G+ TREHL L + I
Sbjct: 255 DLAGDAKYQKTTIHGLTGYTPHFACLVVAADRGITWATREHLGLIAALNI 304
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 370 LRYYLISIWHRKKVMQILTMPPRRRLEVSLLMW 468
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 370 LRYYLISIWHRKKVMQILTMPPRRRLEVSLLMW 468
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein68 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -2
Query: 208 FAHWLCFRTNFTAGLTKLFTNVIEAMLNELFNTKRC*ILNFQKFRLIFVWIFYNKYIHLF 29
F + L T+F + + F + +FN KR ++ ++F+WIF LF
Sbjct: 84 FCYELSVFTHFAISINRFFAVWMPLKYESMFNIKRT------RWMIVFMWIFIGSIAVLF 137
Query: 28 FR 23
++
Sbjct: 138 YQ 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,602,588
Number of Sequences: 27780
Number of extensions: 380129
Number of successful extensions: 1091
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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