Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31055
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    28   0.043
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    28   0.043
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.93 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.0  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   6.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 28.3 bits (60), Expect = 0.043
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +3

Query: 108 HEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTETEMNKETCLQV 287
           HEP  A+Y ++N   +   Y G V  Y+       P   S ++ P T    M     +Q 
Sbjct: 412 HEPGAAYYQNENMLQKNAEYSGKVGYYENNHYNGDPNYISPEVFPNTNNAIMTPPASVQT 471

Query: 288 NSTQD 302
            S+ +
Sbjct: 472 ESSDN 476


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 0.043
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +3

Query: 108 HEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTETEMNKETCLQV 287
           HEP  A+Y ++N   +   Y G V  Y+       P   S ++ P T    M     +Q 
Sbjct: 360 HEPGAAYYQNENMLQKNAEYSGKVGYYENNHYNGDPNYISPEVFPNTNNAIMTPPASVQT 419

Query: 288 NSTQD 302
            S+ +
Sbjct: 420 ESSDN 424


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 93  VYLGVPLLCILDSIVVATLYRHIQMRRPRK 4
           V +  PL+  L + V    YRH Q RR  +
Sbjct: 383 VLIIAPLIATLIATVTVNYYRHKQKRRDER 412


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 123 AWYDSKNSKSRIDYYGGM 176
           AW+D  ++ S +D  GGM
Sbjct: 188 AWWDVHSTGSWLDMSGGM 205


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 171 LHSNRFLICCSYCRTKHRMAHAVQH 97
           +H+N     C  CR + R  H + H
Sbjct: 240 IHTNEKPFECDKCRGRFRRRHHLVH 264


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 382 DTAKWRWYSRSAIS*TNTRCGLNTRR 459
           DTA  +WY    +  T T  G N +R
Sbjct: 220 DTAPPQWYQHQPLLFTYTDDGKNQQR 245


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 506 FHLISDRYGHRVPFQSLLVFNP 441
           +++      H +P  S LVFNP
Sbjct: 934 YYMCEGERKHHMPCPSNLVFNP 955


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 210 PPYGTSIKIAPVTTETE 260
           PPY    +I  VT +TE
Sbjct: 486 PPYPNRTQITEVTQQTE 502


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 111 EPFYAWYDSKNSKSRIDYY 167
           EP + W  + +SK +  YY
Sbjct: 224 EPDHKWKKNDSSKKKTRYY 242


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 59  TPLWWRPFIDISRCEGH 9
           T L +RPF    RC  H
Sbjct: 689 TQLIYRPFSHFPRCGNH 705


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,997
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)