Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31055
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 29 1.5
U97017-4|AAB52358.1| 156|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z92808-4|CAD54148.1| 928|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z92808-3|CAB07268.1| 946|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81476-15|CAD54124.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.6
Z81476-14|CAB03924.1| 946|Caenorhabditis elegans Hypothetical p... 28 4.6
AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical ... 28 4.6
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 27 6.1
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 27 6.1
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 30.7 bits (66), Expect = 0.65
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 90 IPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPP-YGTSIKIAPVTTETEMN 266
IP+ ++ + ++K ++ +G V+ YQ T + PP Y +S P E+
Sbjct: 456 IPFGQVEQQPIPMNPFGSAKPTVNKFGMKVEPYQTTDYMLPPGYPSSSIYLPQPAYPEVK 515
Query: 267 KETCLQVNSTQDQLQDIQSVLP 332
+ + ++STQ Q +P
Sbjct: 516 PNSSVILSSTQSQNNTSPQTIP 537
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 240 PVTTETEMNKETCLQVNSTQDQLQDIQSV 326
P TTE +NK ++N T D+LQ QSV
Sbjct: 49 PNTTENVLNKALFAEMNETLDRLQSDQSV 77
>U97017-4|AAB52358.1| 156|Caenorhabditis elegans Hypothetical
protein F47B3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = -1
Query: 230 YRSTVGWVDR*RELVSLDHTSIVIDS*FAVLTVVPSIEWLMQFS----IGYI*ESLYCVY 63
Y + VGW + TS++ F V+ +PSI W++ S I E +YC
Sbjct: 22 YYTGVGWATFVSSVGIFVTTSLLTLYLFRVVDTLPSINWIVCLSTRTEIIIFQEMVYCFA 81
Query: 62 WT 57
WT
Sbjct: 82 WT 83
>Z92808-4|CAD54148.1| 928|Caenorhabditis elegans Hypothetical
protein M04C3.1b protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 212 TLRYFYKDRAGHNGNRDEQGDVPASQFDA-RSAARHPI-SATGHDRF*IYSAQKQCRMPT 385
T+ YFY N N + D+ + +D + A PI A +R +Y A K M T
Sbjct: 319 TISYFYNRTKSRNSNELARNDIVITTYDTLKKEANLPIFKAVKWERIILYEANKISDMNT 378
>Z92808-3|CAB07268.1| 946|Caenorhabditis elegans Hypothetical
protein M04C3.1a protein.
Length = 946
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 212 TLRYFYKDRAGHNGNRDEQGDVPASQFDA-RSAARHPI-SATGHDRF*IYSAQKQCRMPT 385
T+ YFY N N + D+ + +D + A PI A +R +Y A K M T
Sbjct: 319 TISYFYNRTKSRNSNELARNDIVITTYDTLKKEANLPIFKAVKWERIILYEANKISDMNT 378
>Z81476-15|CAD54124.1| 928|Caenorhabditis elegans Hypothetical
protein M04C3.1b protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 212 TLRYFYKDRAGHNGNRDEQGDVPASQFDA-RSAARHPI-SATGHDRF*IYSAQKQCRMPT 385
T+ YFY N N + D+ + +D + A PI A +R +Y A K M T
Sbjct: 319 TISYFYNRTKSRNSNELARNDIVITTYDTLKKEANLPIFKAVKWERIILYEANKISDMNT 378
>Z81476-14|CAB03924.1| 946|Caenorhabditis elegans Hypothetical
protein M04C3.1a protein.
Length = 946
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 212 TLRYFYKDRAGHNGNRDEQGDVPASQFDA-RSAARHPI-SATGHDRF*IYSAQKQCRMPT 385
T+ YFY N N + D+ + +D + A PI A +R +Y A K M T
Sbjct: 319 TISYFYNRTKSRNSNELARNDIVITTYDTLKKEANLPIFKAVKWERIILYEANKISDMNT 378
>AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical
protein F54E2.5 protein.
Length = 710
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/36 (30%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -2
Query: 463 KVFLYLTHIVYL--FSLSPTGCTISIWPCRHPALFL 362
++F +++H++ +S+ + I+I PC+ PA+FL
Sbjct: 478 EIFSFISHLIDFCHYSILFSNLVIAIHPCQFPAVFL 513
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 294 TQDQLQDIQSVLPDMTDFKYIRHRNNAGCRHGQMEMV 404
T+D+ + Q++L + DF RH + RH ++E+V
Sbjct: 375 TKDEQSNKQNILCESDDFNMNRHHFSVYIRHCKLEVV 411
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 294 TQDQLQDIQSVLPDMTDFKYIRHRNNAGCRHGQMEMV 404
T+D+ + Q++L + DF RH + RH ++E+V
Sbjct: 375 TKDEQSNKQNILCESDDFNMNRHHFSVYIRHCKLEVV 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,245,592
Number of Sequences: 27780
Number of extensions: 290234
Number of successful extensions: 885
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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