Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31054
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 37 0.015
At3g28770.1 68416.m03591 expressed protein 36 0.020
At3g29075.1 68416.m03637 glycine-rich protein 35 0.045
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.10
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.10
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 33 0.18
At5g52550.1 68418.m06525 expressed protein 32 0.42
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 31 0.56
At1g56660.1 68414.m06516 expressed protein 31 0.74
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 0.98
At3g26050.1 68416.m03244 expressed protein 30 1.3
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.3
At2g22795.1 68415.m02704 expressed protein 30 1.7
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 30 1.7
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 1.7
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.3
At3g05110.1 68416.m00555 hypothetical protein 29 2.3
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 29 3.0
At4g19550.1 68417.m02875 expressed protein 29 3.0
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 29 3.0
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 29 3.9
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 29 3.9
At1g47900.1 68414.m05334 expressed protein 29 3.9
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 5.2
At5g54410.1 68418.m06777 hypothetical protein 28 5.2
At2g46900.1 68415.m05857 expressed protein contains Pfam profile... 28 5.2
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 5.2
At5g65620.1 68418.m08255 peptidase M3 family protein / thimet ol... 28 6.9
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 28 6.9
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 28 6.9
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.9
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 6.9
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 27 9.1
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 27 9.1
At4g40020.1 68417.m05666 hypothetical protein 27 9.1
At2g31410.1 68415.m03838 expressed protein 27 9.1
At1g12120.1 68414.m01404 expressed protein contains Pfam domain ... 27 9.1
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 397 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 576
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLS 934
Query: 577 AEFNFRN-QLKVVKKKEFTLEEEDKEKKPD 663
+ R +L+ + K+ L+EE + KK +
Sbjct: 935 EKIKGRELELETLGKQRSELDEELRTKKEE 964
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 36.3 bits (80), Expect = 0.020
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 516
+N + ED ++ K H ++ + E D+K E K + EI SQ N++ K K
Sbjct: 1126 QNSNKKKEDKNEKK-KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKK 1184
Query: 517 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKP 681
+ + K E + + ++K + N + +KK+ ++EE K+K+ K KP
Sbjct: 1185 SSKDQQKKKEKEMKESEEKKLKKNEED-----RKKQTSVEENKKQKETKKEKNKP 1234
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 35.1 bits (77), Expect = 0.045
Identities = 27/107 (25%), Positives = 56/107 (52%)
Frame = +1
Query: 349 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 528
DD ++ K KDY + DEK + K+KD + NS+ ++ + K K K
Sbjct: 140 DDGDDGHKKHSGKDYDDG-----DEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYK 194
Query: 529 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 669
+ ++ + + +KK ++N ++ K KKK + ++++K+KK +++
Sbjct: 195 EHHD-DDDYDEKKKKKKDYNDDDEKK--KKKHYNDDDDEKKKKHNYN 238
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 519
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 520 TLKKVSKYENKF 555
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 519
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 520 TLKKVSKYENKF 555
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 504
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 505 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL--KVVKKKEFTLEEEDKEKKPD 663
K LK+ +KF++ QK ++F ++L +++KK L E+ + K D
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKLNTNLLEKKMEELAEDFRMKMED 337
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 487 VNDLRGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVK--KKEFTLEEEDKEKK 657
V R K VK + + + E K +L+K A R +L+ K KKE LE D+E
Sbjct: 15 VRKARKKKVKGVVDPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDS 74
Query: 658 PDWSKGKPGRSEGKR 702
D +K K R E +R
Sbjct: 75 ADAAKKKQERDELER 89
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 31.5 bits (68), Expect = 0.56
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +1
Query: 358 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 537
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 538 KYENKFAKLQKKAAE---FNFRNQLKVVKKKEFTLEEEDKEKK 657
+ + F L +K AE N NQ +++++ E ++ K+
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARKE 317
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.1 bits (67), Expect = 0.74
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Frame = +1
Query: 334 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 513
K + +++ E K+ K+ E +++K D E +K ++S ++ + GK
Sbjct: 122 KHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKE----KKHEDVSQEKEELEEEDGKKN 177
Query: 514 KPTLKKVSKYENKFAK--LQKKAAEFNFRNQLKVVK-KKEF----TLEEEDKEKKPD 663
K K S E K K +KK E + N+ K VK KKE LE+ED+EKK +
Sbjct: 178 KKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKE 234
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 523 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKG-KPGR-SEG 696
+K+ +NK + + AE + K K+K+ + E+EDK+ K KG KP + EG
Sbjct: 242 MKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEG 301
Query: 697 KR 702
K+
Sbjct: 302 KK 303
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 397 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 576
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 577 AEFNFRNQLKVVKK 618
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 448 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 624
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 625 FTLEEEDKEKK 657
F + E+K KK
Sbjct: 415 FFKKVEEKNKK 425
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 430 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 603
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 604 KVVKKKEFTLE-EEDKEKK 657
++KKE L E++E+K
Sbjct: 64 LELEKKEERLRLVEERERK 82
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 352 DANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 528
+ NED +++ + E EDE + E ++ E + ++ N+ + K
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 529 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 657
+ K E + A Q+++ E N+ + +K+E + +EE KEK+
Sbjct: 543 ENEKIEKEEASSQEESKE----NETETKEKEESSSQEETKEKE 581
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = +1
Query: 430 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 609
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 610 VKKKEFTLEEEDKEKKPDWSKGKP 681
+ + TLE + + W +G P
Sbjct: 1445 AQNRRLTLE----DLEDSWDRGIP 1464
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 403 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 573
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 574 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 663
A + +Q K + ++ +E+ K D
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEELTAKVD 206
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 334 KPKNIDDANEDTIKRVCKDYHERIARLED 420
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +1
Query: 430 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 609
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 610 VKKKEFTLEEEDKEKK 657
K+KE L++ +++
Sbjct: 95 EKEKELELKQRQVQER 110
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/84 (21%), Positives = 38/84 (45%)
Frame = +1
Query: 430 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 609
DL Y + D+ +S S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1338 DLRYS-NQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 610 VKKKEFTLEEEDKEKKPDWSKGKP 681
+ + TLE + + W +G P
Sbjct: 1397 AQNRRLTLE----DLEDSWDRGIP 1416
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Frame = +1
Query: 523 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWSK 672
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW++
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWNE 175
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 29.1 bits (62), Expect = 3.0
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEY-IVKRKDMEI--SDLNSQVNDLRGKF 510
K + +D I+ H A+ + DL++ ++K K + I +D +Q ++G
Sbjct: 102 KKTTEIKKDVIRTTVLKVHIHCAQCDK---DLQHKLLKHKAIHIVKTDTKAQTLTVQGTI 158
Query: 511 VKPTLKK-VSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSK 672
L + K +K A++ E + + + KKKE EEDK+KK D K
Sbjct: 159 ESAKLLAYIKKKVHKHAEIISSKTEEEKKKEEEDKKKKE----EEDKKKKEDEKK 209
>At5g65180.2 68418.m08199 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 311
Score = 28.7 bits (61), Expect = 3.9
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +1
Query: 349 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 522
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 53 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 110
Query: 523 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 657
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 111 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 159
>At5g65180.1 68418.m08198 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 439
Score = 28.7 bits (61), Expect = 3.9
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +1
Query: 349 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 522
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 238
Query: 523 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 657
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 239 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 287
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 385 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTLKKVSKY-ENKF 555
KD+ E+I +++ + E V++ + ++ DLN +++ + V + +K+ SK E+
Sbjct: 88 KDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAV 147
Query: 556 AKLQKKAAE-FNFRNQLKVVKKKEFTLEE 639
+ +K AE +N L+ V + T E+
Sbjct: 148 SGWEKADAEALALKNTLESVTLSKLTAED 176
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 287 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 448
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 28.3 bits (60), Expect = 5.2
Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 8/127 (6%)
Frame = +1
Query: 346 IDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT- 522
I A + I K E + +E D +RK E L ++ K K
Sbjct: 27 IVQALAEAIDAANKKLREETLQSNEEANDAMETFRRKTNEQKRLENEKRKQALKDAKDLK 86
Query: 523 -LKKVSKYENKFAKLQ-KKAAEFNFRNQLKVVKKKEFTLEE-----EDKEKKPDWSKGKP 681
L +K ENK K Q +K L KKK+ T EE E+K+K+P K K
Sbjct: 87 DLTYKTKVENKLKKTQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKKD 146
Query: 682 GRSEGKR 702
E K+
Sbjct: 147 PTEEKKK 153
>At2g46900.1 68415.m05857 expressed protein contains Pfam profile
PF04910: Protein of unknown function, DUF654
Length = 627
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +1
Query: 415 EDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFR 594
+ E+ D E I ++K+ E +D S V D K KK K +NK + AE
Sbjct: 51 DPEEIDDETIAEKKN-EDADHQSSVADHVQPVSKNKSKKKKKKKNKESGSNVPKAEMTLD 109
Query: 595 NQLKVVKKKEFTLEEEDKEKKPDWSKGKPGRS 690
L+ + + +++ +E KP+ K S
Sbjct: 110 ETLEALGLNANSKQDKVQETKPNADSSKKASS 141
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 344 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 463
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At5g65620.1 68418.m08255 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P27237
Oligopeptidase A (EC 3.4.24.70) {Salmonella
typhimurium}; contains Pfam profile PF01432: Peptidase
family M3
Length = 791
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 685 SRACPSTSQAFSLCLPLPR*IPSFSRPSIGY 593
S CP S +FS CLP PR S S S +
Sbjct: 39 SYPCPIWSSSFSFCLPPPRSTTSTSLSSSSF 69
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 523 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 663
L+ V N K + KA+ N + + + LEEED+E++P+
Sbjct: 285 LEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPE 331
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/100 (20%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 373 KRVCKDYHERIARLEDEKFDLEYIVKR-KDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 549
K+ ++ +++ L+ L+ I+++ E+ + S ++LR K V L + E
Sbjct: 47 KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWE-KHMET 105
Query: 550 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 669
K+ +L AA +++ + + + + ++ KP+WS
Sbjct: 106 KWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWS 145
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 445 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 582
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 364 DTIKRVCKDYHERIARLEDEKFDLEYIV 447
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 442 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 618
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 619 KEFTLEEEDKE 651
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 442 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 618
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 619 KEFTLEEEDKE 651
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/102 (24%), Positives = 47/102 (46%)
Frame = +1
Query: 394 HERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKK 573
++ I +L+ ++E ++ + LN Q + + V+ KK+ + E K K + K
Sbjct: 355 NDNIKKLKKMLSEIEVAMEEEKQR--SLNRQ-ESMPKEVVEVVEKKIEEKEKKEEKKENK 411
Query: 574 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGRSEGK 699
+ + + KKE + ++EDKEKK + R GK
Sbjct: 412 KEKKESKKE-----KKEHSEKKEDKEKKEQTHQNFDKRMIGK 448
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 441 HR*KERY-GDLRPELPSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREK 617
HR R+ + +P+L + QR+I++A+ + +++++IR E R+ + E R+K
Sbjct: 92 HRSSGRFVKNRKPDLEEMKRQREIKKAYKERVNELKEEIRSNKVEKRKKKE--EREKRKK 149
Query: 618 EGIHLGRGRQREK 656
E + L G + +K
Sbjct: 150 ENV-LRTGTKLQK 161
>At1g12120.1 68414.m01404 expressed protein contains Pfam domain
PF05904: Plant protein of unknown function (DUF863)
Length = 483
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +1
Query: 577 AEFNFRNQ---LKVVKKKEFTLEEEDKEKKPDWSKGKPGRS 690
+E +++NQ K+V + + E++D KP+ K KPG S
Sbjct: 322 SEISYQNQDLQSKLVLRTNSSSEDQDFPDKPEMGKAKPGCS 362
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,379,063
Number of Sequences: 28952
Number of extensions: 191917
Number of successful extensions: 857
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -