Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31051
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6RKI9 Cluster: Polyketide synthase; n=3; Pezizomycotin...    34   4.2  
UniRef50_Q176A4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  

>UniRef50_Q6RKI9 Cluster: Polyketide synthase; n=3;
            Pezizomycotina|Rep: Polyketide synthase - Botrytis
            cinerea (Noble rot fungus) (Botryotinia fuckeliana)
          Length = 2544

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 455  HIGKEIYILCQICKKPYLLNTDLNIPK-YFFS 547
            H+G EI++ C    K  LLNT+ NIPK + FS
Sbjct: 1977 HLGAEIFVTCGNDAKVELLNTEFNIPKDHIFS 2008


>UniRef50_Q176A4 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 672

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 16/54 (29%), Positives = 33/54 (61%)
 Frame = -3

Query: 425 NKEKMKKVYLKKISEFLLYQILLKVHSYKQKNQTESISNATSMTKLIY*IPCTY 264
           N++K+++    +  E+L Y+++ +V +  + N  E+IS+AT+  K  +   CTY
Sbjct: 264 NRDKVEQDIENETIEYLTYEVIREVENESEPNSDENISSATAKPKNEH--KCTY 315


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,227,982
Number of Sequences: 1657284
Number of extensions: 10476367
Number of successful extensions: 21571
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21567
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)