Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31051
         (742 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0024 - 19934529-19935298,19935359-19935871,19936147-199366...    29   3.9  
01_06_1775 - 39808794-39808919,39809021-39809127,39810594-39812178     29   5.1  

>03_05_0024 -
           19934529-19935298,19935359-19935871,19936147-19936635,
           19936738-19937044,19937104-19937130
          Length = 701

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 93  ITPIVCMSTLLSEEVHNHYNSAIN 22
           +  I  + TLL E+VHNH  S IN
Sbjct: 127 VAAITLLDTLLQEDVHNHVLSIIN 150


>01_06_1775 - 39808794-39808919,39809021-39809127,39810594-39812178
          Length = 605

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 603 KVTLL*ESHLNCAKSNLYMLKKYLGIFKSVFNKYGFLQI*HKI 475
           K  L  + H  C KS L + K  L    +V+ K G+  + HK+
Sbjct: 361 KFELCIQLHAYCYKSGLCLYKPVLNTLIAVYGKCGYATLAHKV 403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,226,646
Number of Sequences: 37544
Number of extensions: 228979
Number of successful extensions: 366
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)