Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31051
         (742 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)                   28   6.9  
SB_6538| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   9.1  

>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
          Length = 664

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -2

Query: 165 EHGKYISLIYNLNNMNSTNTY*HYITPIVCMSTLLSEEVHNHY 37
           E+G YI+   N N+ ++++ Y  YIT  V  +   + + + HY
Sbjct: 605 EYGHYITWKVNYNDSSNSDEYGQYITWKVIYNDSSNSDEYGHY 647


>SB_6538| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 927

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -3

Query: 431 YRNKEKMKKVYLKKISEFLLYQILLKVHSYKQK-NQTESISNA 306
           YR K+K  K  +++I+ +L+Y ++L +  Y  K +Q   I+N+
Sbjct: 766 YRLKQKEMKAIIREITLYLIYLMVLTIVVYGSKDSQAFPITNS 808


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,152,064
Number of Sequences: 59808
Number of extensions: 314658
Number of successful extensions: 502
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)