Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31049
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.3  

>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 19  TVMSFRWIFQHCAEAQHYLF 78
           T+    W FQ C  A  YLF
Sbjct: 332 TITRTMWYFQICGSAFSYLF 351


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 326 KLPT*SIFIALFDTTYAPAV 267
           K+P+ S F++LF T   PA+
Sbjct: 150 KMPSLSEFLSLFGTETCPAI 169


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 326 KLPT*SIFIALFDTTYAPAV 267
           K+P+ S F++LF T   PA+
Sbjct: 150 KMPSLSEFLSLFGTETCPAI 169


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 352 DIYLGIVAKKMGIV 393
           D+YLGI  + +GI+
Sbjct: 74  DLYLGITIQTLGII 87


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 675 IAVIITYIQPYE 640
           +A IIT +QPY+
Sbjct: 7   VATIITLLQPYD 18


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,502
Number of Sequences: 336
Number of extensions: 2702
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)