Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31048
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 36 0.004
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 31 0.12
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 31 0.22
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 29 0.50
SPBPB2B2.17c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 29 0.66
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 29 0.88
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 29 0.88
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 29 0.88
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 28 1.2
SPAC977.02 |||S. pombe specific 5Tm protein family|Schizosacchar... 28 1.2
SPBC1348.03 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 28 1.2
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 28 1.2
SPAC750.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 28 1.2
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 28 1.5
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 28 1.5
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 2.0
SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 27 2.0
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 2.7
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 27 2.7
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 27 2.7
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 27 3.5
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.5
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 27 3.5
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 27 3.5
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 27 3.5
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 3.5
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 3.5
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 27 3.5
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 3.5
SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase Pp... 27 3.5
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 26 4.7
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 26 4.7
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 26 4.7
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 26 4.7
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 26 4.7
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 26 6.2
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 26 6.2
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 6.2
SPAC144.15c |cog1||Golgi transport complex subunit Cog1 |Schizos... 26 6.2
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 26 6.2
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 26 6.2
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 8.2
SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|... 25 8.2
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 25 8.2
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 36.3 bits (80), Expect = 0.004
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -1
Query: 497 ERNMPSELHEDSYE--DNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPD 324
E PS L + ++ D T+ ++ TED +DE++ +P RK + S+R ++ D
Sbjct: 1363 EEEEPSALQANGFDWTDGSTVFDKLADDTEDSEDEEDEEPKRKKSKSDRFDDEEKDL--D 1420
Query: 323 EIPYQILNITKQ 288
EIP + +Q
Sbjct: 1421 EIPSTAADFERQ 1432
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 506 KSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDE 393
+S +++ SE S +D ++ E+E DED+E+E
Sbjct: 1329 RSEDQSDTSESEVGSKDDVQSEEVENLESAGDEDEEEE 1366
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 31.5 bits (68), Expect = 0.12
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Frame = -1
Query: 665 IKSKLGNIKRNNGI-TSETVTENI*TETKNTPVPKKKFIYE----NDLYFLLPVLQNSKS 501
IK N+ G TS T T T +PK ++E ND + LL + ++SK
Sbjct: 326 IKQGQSNVSSITGTSTSTTTAATSSTTVTGTVIPKSSTVHEPPSSNDSHPLLQLFKDSKI 385
Query: 500 RERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKY 333
+ + PS S ED++ E+ Q E + +K + TK + Y
Sbjct: 386 SDDDSPSNAEGASTEDSKG-EVSY-SQIELPSLDSSNLSSKKSTIQSKHTKQAEDY 439
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 30.7 bits (66), Expect = 0.22
Identities = 18/90 (20%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -1
Query: 497 ERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEI 318
+ + + H ++ + + + EV + +D+DDEDE + + + + ++Y D +
Sbjct: 181 KNGLSKKQHSEAQPEVQGNDDEVEEEDDDDDDEDEDEDEDEDNNNNNRWLLIEQYPSDIV 240
Query: 317 PYQ-ILNITKQNTDDEVSYQDVDSQFLLSF 231
Y+ +++ ++ T VS D+ S L++
Sbjct: 241 AYENFVSLKRKLTQLYVSIHDLISYVHLNY 270
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 29.5 bits (63), Expect = 0.50
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = -1
Query: 449 ETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQNTDDEV 270
ET IEV + ++ +P+ KYA+ + K Q+K +E+ +N ++E
Sbjct: 72 ETSRIEVHRALDYRSANEKLRPYSKYASKNIELKLQKKEKEEEL---------RNLEEEK 122
Query: 269 SYQDVDSQFLLSFRDDMNAMSR 204
+ + D+ F D ++ +R
Sbjct: 123 AKKKKDANLKRKFLDTLDPKAR 144
>SPBPB2B2.17c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 29.1 bits (62), Expect = 0.66
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +2
Query: 623 LFHCFFLYSLICFLSSMFKSFQCGMILLH 709
L +C+++YS + +SS F+SF G ++++
Sbjct: 52 LLYCWYIYSEVPSVSSKFRSFTFGCVVVY 80
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRK 375
+ S S R PS+L S +D+E E+ + T D+E K RK
Sbjct: 637 EQSSSNSRANPSKLFNISSDDSED-EVPIIEDTTASDEESRAKKIRK 682
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 404 DEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQNTDDEVSYQDVD 252
DE++ P+R Y+ + Q KYT D +L K++ V+ QD+D
Sbjct: 214 DEEKATPYRGYSKPNERATKQSKYTYDRGTTAVL---KEDIYKFVTVQDLD 261
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 28.7 bits (61), Expect = 0.88
Identities = 20/90 (22%), Positives = 40/90 (44%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
+N N + ED+ E+NE + EDE+D++E + + R+ +A+
Sbjct: 82 ENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRKRARH- 140
Query: 335 YTPDEIPYQILNITKQNTDDEVSYQDVDSQ 246
+ Q L+I + +DE +D + +
Sbjct: 141 ----DRRNQFLDIEAEVDEDEEELEDEEDE 166
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 518 LQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDE 393
+ N+ +E E +E+ + NE E + EDE+DEDE
Sbjct: 88 VNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDE 129
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 524 PVLQNSKSRERNMPSELHEDSYEDNE-TIEIEVRPQTEDEDDEDERKPFRKYATSERQTK 348
P++Q+ RN+ E + +EI QTEDE D R A T+
Sbjct: 521 PLIQSGMRHIRNLQDEYRRRRNRTAQRVVEIPNETQTEDEQDGTNTPDNRADAEERELTR 580
Query: 347 AQQKY 333
+Q+ Y
Sbjct: 581 SQRIY 585
>SPAC977.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 623 LFHCFFLYSLICFLSSMFKSFQCGMILLH 709
L +C+++YS + SS F+SF G ++++
Sbjct: 52 LLYCWYIYSEVPSASSKFRSFTFGCVVVY 80
>SPBC1348.03 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 623 LFHCFFLYSLICFLSSMFKSFQCGMILLH 709
L +C+++YS + SS F+SF G ++++
Sbjct: 52 LLYCWYIYSEVPSASSKFRSFTFGCVVVY 80
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = -1
Query: 497 ERNMPSELHEDSYEDNETIEIEVRPQTED-EDDEDERKPFRK--YATSERQTKAQQKYTP 327
E+ E ED ++ E V D EDD D K +S R ++ +K +P
Sbjct: 1416 EKEKEKESIEDEEKNREGSMSPVAKHASDVEDDHDVAKSTAPDFETSSHRPERSSEKKSP 1475
Query: 326 DEIPYQILNITKQNTDDEVSYQDVDSQ 246
+ + + + D+E D+D Q
Sbjct: 1476 SPVFTSVKQTAENDADNEDDKTDMDDQ 1502
>SPAC750.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 623 LFHCFFLYSLICFLSSMFKSFQCGMILLH 709
L +C+++YS + SS F+SF G ++++
Sbjct: 52 LLYCWYIYSEVPSASSKFRSFTFGCVVVY 80
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 27.9 bits (59), Expect = 1.5
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -1
Query: 458 EDNETIEIEV-RPQTEDEDDEDERKPFRKYATSERQTKAQQKY-TPDEIPYQ-ILNITKQ 288
ED E E +P+TE+ D DER +Y + K +KY +E+P + IL
Sbjct: 49 EDEEVDSDEWDKPETENISDLDERSEMVRYLRASGYAKFLEKYLIEEELPVRSILKKLGI 108
Query: 287 NTDDEV-SYQDVD 252
N + ++D+D
Sbjct: 109 NLPSALEEFEDID 121
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -3
Query: 687 WNDLNMEDKKQIREYKKKQWNNVRDGYRKYLNRNQKYARAKEE 559
W + + E K+++REYKK W + + K + + +K A K++
Sbjct: 1121 WRENSEEWKEKMREYKK--WQSTANQRAKQMEKFEKSATEKQK 1161
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDE 321
EDS D+E+ E E ++E++ + + + SE + +++ + DE
Sbjct: 79 EDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDE 128
Score = 26.2 bits (55), Expect = 4.7
Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 620 SETVTENI*TETKNTPVPKKKFIYENDLYFLLPVLQNSKSRERNMPSELHEDSYEDNETI 441
SE+ E +E VPKKK + ++ +S+S + E +S ED+E
Sbjct: 53 SESSEEESESEESEVEVPKKKAVAASE---------DSESDSESSEEEEETESEEDSEVS 103
Query: 440 EIEVRPQTEDEDDEDERKPFRKYATSERQTKAQ--QKYTPDEIPYQILNITKQNTDDEVS 267
+ + + E+E + + SER + +K +E L + + +E S
Sbjct: 104 DESESESESESESEEESESEEESDESERSGPSSFLKKPEKEEAKPAGLKFLRGESSEESS 163
Query: 266 YQDVDSQFLLSFRD 225
++ + + S +D
Sbjct: 164 DEEEGRRVVKSAKD 177
>SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -1
Query: 641 KRNNGITSETVTENI*TETKNTPVPKKKFIYENDLYFLLPVLQNSKSRERNMPSELHEDS 462
+R IT++ T N+ +T N P+ + + L L +LQ+ S ++ SEL E +
Sbjct: 59 QRIRQITAKDKTVNLLRKTLNRPLLHEVDYHGKSLEILDMLLQSRNSMISSLRSELQEKN 118
Query: 461 YEDNE 447
+D +
Sbjct: 119 QKDKK 123
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 27.1 bits (57), Expect = 2.7
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = -1
Query: 590 ETKNTPVPKKKFIYENDLYFLLPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTED 411
E K + K I +D Y ++ VL + S ++ EL D +ED+ T+EIEV +
Sbjct: 112 EGKTPDLDKLSDILRSDEY-MISVLPDD-SVLFSLGDELDSD-FEDDNTLEIEVENPADV 168
Query: 410 EDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQI---LNITKQNTDDEVSY 264
D + +K + Q + +K +E+ Q L++T + D++ Y
Sbjct: 169 SKDAEIKKLKLQNQLLISQLEEIRKDKMNELTSQTTDQLSVTPKKADNDSYY 220
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/30 (36%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDE--DERK 387
E++ +++E++++E + EDE+DE DE K
Sbjct: 203 EEASDEDESVDLEEDEEEEDEEDEEGDEEK 232
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 27.1 bits (57), Expect = 2.7
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Frame = -1
Query: 509 SKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDE---RKPFRKYATSERQTKAQ- 342
+K E N +L + E+ E E E Q EDE+DE+E + + + + A+
Sbjct: 324 NKDLEENEEDDLGDFIAEEEEEEEQE-EEQEEDEEDEEEVGAGSDIKGFDADKEASVARA 382
Query: 341 --QKYTPDEIPYQILNITKQNTDDEVSYQD 258
KY DE+ + + T E S D
Sbjct: 383 TINKYEDDEVIPSAVETDRSETVTETSVGD 412
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = -1
Query: 464 SYEDNETIEI-EVRPQ-TEDEDDEDERKPFRKYATSE-----RQTKAQQKYTPDEI 318
S N ++E+ E+ ++D DDE +K + +E Q K QQK+ PD+I
Sbjct: 910 SLSPNTSVELPEINSDYSDDSDDEGNKKKVNLPSWAESPELREQLKRQQKWDPDKI 965
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/105 (16%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = -1
Query: 440 EIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQNTDDEVSYQ 261
E+E E ++ + + FR++A E++ K ++ E NI D++ Q
Sbjct: 759 ELEDMIHDEQQETKSGHEQFREHAMKEKEKKGKENENMGETTVDHENINSNVMDEQGEKQ 818
Query: 260 DVD-SQFLLSFRDDMNAMSRSQKLKFKLGMIQLIQHVTEDRVSDP 129
D + + +++ ++ M++L+ + + +P
Sbjct: 819 KDDVVDMVRKITEKAQLFLSHEQITIRVEMLKLLSYGSNVLAKEP 863
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQ 339
E+ E+ + E + P+ E+ DDE E+K + E T+ ++
Sbjct: 221 EEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEE 264
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -1
Query: 416 EDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQNTDDEVSYQDVDSQFLL 237
E+E++ED KP RK S + KA K D + + +++ + E S + +
Sbjct: 99 EEEEEEDSEKPVRKNKKSSK--KASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKS 156
Query: 236 SFRDD 222
+DD
Sbjct: 157 KSKDD 161
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
ED +D E+ +++ + E+E++E+E TS++ ++++ K
Sbjct: 66 EDIIDDEESAQVD-EEELEEEEEEEEDATPEPVVTSKKNSRSKPK 109
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -1
Query: 521 VLQNSKSRE-RNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKA 345
++++ ++E N +E DS E+ ETI+ D +E+E + + +Y +++ +
Sbjct: 412 IIEDQDNQEISNHVAEEKIDSDEE-ETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQE 470
Query: 344 QQKYTPDEIPYQ 309
+ ++ PDE+ Q
Sbjct: 471 ELEF-PDEVELQ 481
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 524 PVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKA 345
PVL + R+ P + ++ + I + + ED+DD +PF K ++ A
Sbjct: 282 PVLLTAPRRKNKSPKKSKPAVFKPVKPIFSD---EDEDDDDLTASQPFSKGICNDSMQVA 338
Query: 344 QQKYTPDEIP 315
++ +T +EIP
Sbjct: 339 KKNFT-EEIP 347
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 708 CKRIIPHWNDLNMED 664
CK PHWNDL+ D
Sbjct: 403 CKPFEPHWNDLSPHD 417
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -1
Query: 464 SYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIP 315
S E E I + + ED+DDE P + Y + R T A + +E P
Sbjct: 163 SMEWVENIASKFDGEEEDDDDEKYSAPSKIYPSPRRSTAATLESAYEERP 212
>SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase
Ppk34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 488 MPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFR 378
+PS L ++Y +ET + P++++ED+ K +R
Sbjct: 5 LPSFLSSNNYNSSETSLLTEGPESDEEDEGPLLKQYR 41
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.2 bits (55), Expect = 4.7
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Frame = -1
Query: 512 NSKSRERNMPS-ELHEDSYEDNETIEIEVRPQTEDEDDEDERK--------PFRKYATSE 360
N+ S E++ + E ++ + + E+R + +DDE E PF K +
Sbjct: 464 NANSSEKDETTIEKYKRKAAERKQRRKELRQLKKTKDDEGEGSDVDLGFDDPFFKDKDAS 523
Query: 359 RQTKAQQK--YTPDEIPY-----QILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSRS 201
R K +K +T E P ++ N+ +++ +D D + +L ++
Sbjct: 524 RNNKKNKKGKHTQIEDPTAASKEELENLVREDENDSEQLDHFDMKSILK----AEKFKKN 579
Query: 200 QKLKFKLGMIQLIQHVTEDRVSDP 129
+KLK K ++ +Q E VSDP
Sbjct: 580 RKLKKKASNLEGLQEGFEADVSDP 603
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 332 TPDEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMS 207
T D+I Q+ + E ++ +SQ+LLS +D +NA++
Sbjct: 440 TNDDIVNQVAAQFLDEREFETDEEEEESQYLLSTKDAINAIN 481
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 26.2 bits (55), Expect = 4.7
Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 5/134 (3%)
Frame = -1
Query: 527 LPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTK 348
+PVL N E + ED ++E + +E E+E E S K
Sbjct: 230 VPVLFNEADEEEEAVEAMEEDEVAEDEDVVLETSISQEEEKKNIENPDTEVTFISADTKK 289
Query: 347 AQQKYT--PDEIPYQIL--NITKQNTDDEVSYQDVDSQF-LLSFRDDMNAMSRSQKLKFK 183
+ T P EI L I K D V + + F LS D+ + F
Sbjct: 290 VTEIPTVHPREIDAFWLQREIAKYFADAVVCQEKTNQAFEALSADYDLGELENELMSIFD 349
Query: 182 LGMIQLIQHVTEDR 141
L+Q +T++R
Sbjct: 350 YEHFYLVQLLTKNR 363
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/121 (18%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = -1
Query: 650 GNIKRNNGITSETVTENI*TETKNTP-VPKK-KFIYENDLYFLLPVLQNSKSRERNMPSE 477
G ++R E + + + KN P +P++ + E D L ++ + ++
Sbjct: 287 GQLERRTQFIIEVLFQTRKDKFKNNPTIPQELDLVEEEDQITHYISLDDNLDVQESLGIF 346
Query: 476 LHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNI 297
++ YE+NE ++ + E+D+DE + + SE +++++ + ++ Q+++
Sbjct: 347 HYDPDYEENEKKYDAIKHEILGEEDDDENEEDEE--DSEETSESEEDESVNDEKPQVIDQ 404
Query: 296 T 294
T
Sbjct: 405 T 405
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 136 VTPSVSVETSNDPLLGKNTPNTLPKLQLRALYKALSY 26
+T VSV+ +D L + T P LQL+ +Y L +
Sbjct: 188 LTVLVSVKKPSDQLTSLRSQFTFPDLQLKLIYNQLLF 224
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 446 TIEIEVRPQ--TEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNIT 294
T+ ++VRP+ EDEDDE+ + ++ ++ P + Q LN+T
Sbjct: 46 TLLVKVRPRIPVEDEDDEELDEQMQELLEESQREFVLCTLKPGSLYQQPLNLT 98
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 25.8 bits (54), Expect = 6.2
Identities = 20/105 (19%), Positives = 44/105 (41%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
Q + +RN E E + + + +R E+E+D D + F + ++
Sbjct: 243 QRNLELQRNGSFEEIERARQRFALLGDNIREPQEEENDVDVDEIFNRQQLNQPALDLNDA 302
Query: 335 YTPDEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSRS 201
+ + +P + ++ QN D + QF + D+ +++S S
Sbjct: 303 NSSNSVPVEFNSLHSQNVDYRDEVDSLRPQFNV---DEQSSISHS 344
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = +3
Query: 189 FQFLRSRHRIHVVSEAQQELRIHILVADFIVRILFCYV*NL 311
F+ L++R+ ++++SE + LR H++ + I ++ + NL
Sbjct: 682 FEDLKARNTLYLISEMRTFLRDHVVPSFHIGSVILSEIDNL 722
>SPAC144.15c |cog1||Golgi transport complex subunit Cog1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 701
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 297 NKTEYGR*SQLPR-CGFSIPAELPRRHECDVEISETE 190
NK +Y + S+L C +PA+LP H+C + ++ E
Sbjct: 128 NKEQYLQSSKLLIFCLRILPADLPNDHQCHILVNRLE 164
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 25.8 bits (54), Expect = 6.2
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = -1
Query: 479 ELHEDSYEDNETIEI--EVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQI 306
EL +D+ E E E+E++E+E + + R+ K Q + + I
Sbjct: 289 ELSQDTRESTAEPRAAGEESASEEEEEEEEEEEEENEADDETRENKRQNRLVREFISELE 348
Query: 305 LNITKQNTD-DEVSYQDVDSQFLLSFRDDMNAMSRSQKLK 189
+I K+ D DE + + ++FL D+N M +LK
Sbjct: 349 SSIQKRRKDADEATNPILRNRFLA----DVNRMVTELELK 384
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 600 YLNRNQKYARAKEEIHLRE*PLFFVTGFTKQQISRTEHA 484
Y + K R +E + +E ++TGF K+++ R +HA
Sbjct: 14 YSRKKGKKQRLEEIVFDKEKRKEYLTGFHKRKVERRKHA 52
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 687 WNDLNMEDKKQIREYKKKQWNNVRDGYRKYLNRNQKYA 574
W+ N E+++QIRE+ W ++ + R+ L + +K A
Sbjct: 251 WSSSNTEEREQIREF----WLSLSESERRSLVKVEKEA 284
>SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 632 CFFLYSLICFLSSMFKSFQCGMILLHIS 715
CFFLYSL+ + FQ +I++H+S
Sbjct: 292 CFFLYSLLTPFFDIHLQFQ--LIVMHMS 317
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 8.2
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = -1
Query: 464 SYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPD---EIPYQILNIT 294
S E +E + V+ + + E+E + ++ Q+K +K D Q ++
Sbjct: 222 SNESDEDGDFLVKKEKTKKQLEEEEHGYERFLLESAQSKEARKVLEDLSSSYVKQRPSVL 281
Query: 293 KQNTDDEVSYQDVDSQFLLSF 231
DDE + D FLL +
Sbjct: 282 VNTEDDENGIKPSDEDFLLKY 302
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,891,123
Number of Sequences: 5004
Number of extensions: 60875
Number of successful extensions: 328
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -