Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31048
(716 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put... 42 5e-04
At5g17930.1 68418.m02102 MA3 domain-containing protein low simil... 40 0.002
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 35 0.047
At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)... 34 0.082
At4g22320.1 68417.m03227 expressed protein 32 0.44
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 32 0.44
At1g11690.1 68414.m01342 hypothetical protein 32 0.44
At4g10670.1 68417.m01743 transcription elongation factor-related... 31 0.58
At3g47910.1 68416.m05224 expressed protein low similarity to non... 31 0.58
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 31 0.58
At3g25840.1 68416.m03219 protein kinase family protein contains ... 31 0.76
At5g60030.1 68418.m07527 expressed protein 31 1.0
At3g07020.2 68416.m00834 UDP-glucose:sterol glucosyltransferase ... 31 1.0
At3g07020.1 68416.m00833 UDP-glucose:sterol glucosyltransferase ... 31 1.0
At2g22795.1 68415.m02704 expressed protein 31 1.0
At2g22080.1 68415.m02622 expressed protein 31 1.0
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At4g02810.1 68417.m00381 expressed protein 30 1.3
At2g33400.1 68415.m04094 expressed protein 30 1.3
At1g32830.1 68414.m04046 hypothetical protein similar to At2g049... 30 1.3
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 30 1.8
At4g20280.1 68417.m02962 transcription initiation factor IID (TF... 30 1.8
At3g56150.1 68416.m06241 eukaryotic translation initiation facto... 30 1.8
At3g24140.1 68416.m03031 basic helix-loop-helix (bHLH) family pr... 30 1.8
At2g42190.1 68415.m05221 expressed protein ; similar to GP|9826|... 30 1.8
At1g02730.1 68414.m00226 cellulose synthase family protein simil... 30 1.8
At5g61070.1 68418.m07663 histone deacetylase family protein (HDA... 29 2.3
At5g03710.1 68418.m00331 hypothetical protein 29 2.3
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 29 2.3
At3g17160.1 68416.m02189 expressed protein 29 2.3
At1g65440.1 68414.m07424 glycine-rich protein 29 2.3
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 29 2.3
At1g55380.1 68414.m06334 DC1 domain-containing protein contains ... 29 2.3
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 29 3.1
At4g23880.1 68417.m03433 expressed protein 29 3.1
At3g29075.1 68416.m03637 glycine-rich protein 29 3.1
At3g28770.1 68416.m03591 expressed protein 29 3.1
At2g21540.1 68415.m02563 SEC14 cytosolic factor, putative / phos... 29 3.1
At1g80810.1 68414.m09481 expressed protein similar to androgen-i... 29 3.1
At1g66070.1 68414.m07499 translation initiation factor-related s... 29 3.1
At5g40450.1 68418.m04905 expressed protein 29 4.1
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 29 4.1
At1g79180.1 68414.m09232 myb family transcription factor (MYB63)... 29 4.1
At5g61940.1 68418.m07775 ubiquitin carboxyl-terminal hydrolase-r... 28 5.4
At5g56950.1 68418.m07109 nucleosome assembly protein (NAP), puta... 28 5.4
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 28 5.4
At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recogniti... 28 5.4
At3g49470.1 68416.m05407 nascent polypeptide-associated complex ... 28 5.4
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 28 5.4
At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-... 28 5.4
At1g67140.1 68414.m07638 expressed protein 28 5.4
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 28 7.1
At5g47210.1 68418.m05821 nuclear RNA-binding protein, putative s... 28 7.1
At5g28080.1 68418.m03391 protein kinase family protein contains ... 28 7.1
At5g17910.1 68418.m02100 expressed protein 28 7.1
At4g31610.1 68417.m04490 transcriptional factor B3 family protei... 28 7.1
At3g51150.1 68416.m05601 kinesin motor family protein contains P... 28 7.1
At3g24560.3 68416.m03086 expressed protein contains Pfam profil... 28 7.1
At3g24560.2 68416.m03084 expressed protein contains Pfam profil... 28 7.1
At3g24560.1 68416.m03085 expressed protein contains Pfam profil... 28 7.1
At3g10800.1 68416.m01300 bZIP transcription factor family protei... 28 7.1
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 28 7.1
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 28 7.1
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 7.1
At1g55050.1 68414.m06288 expressed protein ; expression supporte... 28 7.1
At5g63550.1 68418.m07976 expressed protein 27 9.4
At5g47090.1 68418.m05806 expressed protein 27 9.4
At5g39040.1 68418.m04724 ABC transporter (TAP2) TAP-like ABC tra... 27 9.4
At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar ... 27 9.4
At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar ... 27 9.4
At5g09850.1 68418.m01139 transcription elongation factor-related... 27 9.4
At5g09460.1 68418.m01095 expressed protein 27 9.4
At4g35335.1 68417.m05021 nucleotide-sugar transporter family pro... 27 9.4
At4g17620.1 68417.m02636 glycine-rich protein 27 9.4
At4g11560.1 68417.m01853 bromo-adjacent homology (BAH) domain-co... 27 9.4
At4g10770.1 68417.m01757 oligopeptide transporter OPT family pro... 27 9.4
At4g03565.1 68417.m00490 expressed protein 27 9.4
At2g45460.1 68415.m05654 forkhead-associated domain-containing p... 27 9.4
At2g25830.1 68415.m03099 YebC-related contains Pfam profile PF01... 27 9.4
At2g20950.3 68415.m02473 expressed protein 27 9.4
At2g20950.2 68415.m02472 expressed protein 27 9.4
At2g20950.1 68415.m02471 expressed protein 27 9.4
At1g08340.1 68414.m00922 rac GTPase activating protein, putative... 27 9.4
At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P... 27 9.4
>At3g16620.1 68416.m02124 chloroplast outer membrane protein, putative
similar to chloroplast protein import component Toc159
[Pisum sativum] GI:8489806, chloroplast outer envelope
protein 86 [Pisum sativum] GI:599958, GTP-binding protein
[Pisum sativum] GI:576509
Length = 1089
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Frame = -1
Query: 527 LPVLQNSKSRERNMPSELHEDSYED-NETIEIEVRPQTEDEDDEDERKPFRKYATSE--R 357
LP+L +S + R ++L E Y+D ++ +++ +E+E + DE PF++ +E +
Sbjct: 693 LPLLLSSLLQSRPQ-AKLPEQQYDDEDDEDDLDESSDSEEESEYDELPPFKRLTKAEMTK 751
Query: 356 QTKAQQKYTPDEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSRS 201
+K+Q+K DE+ Y+ K+ +E + + +F +D N S +
Sbjct: 752 LSKSQKKEYLDEMEYREKLFMKRQMKEERKRRKLLKKFAAEIKDMPNGYSEN 803
>At5g17930.1 68418.m02102 MA3 domain-containing protein low
similarity to SP|Q9P6R9 Cell cycle control protein cwf22
{Schizosaccharomyces pombe}; contains Pfam profile
PF02847: MA3 domain
Length = 707
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYE-DNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQ 339
+ + ++R+ + HED E NE +E E ++E D+E E +P K ++ K ++
Sbjct: 158 RKKRKKKRSEEKQDHEDVDELANEDLEHE---ESEFSDEESEEEPVGK--RDRKRHKKKK 212
Query: 338 KYTPDEIPYQILNITKQNTDDEVSYQDVDS 249
K +E+ ++NIT + V+Y D S
Sbjct: 213 KSVDEELESDLMNITDDGESETVNYHDSPS 242
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/80 (25%), Positives = 42/80 (52%)
Frame = -1
Query: 434 EVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQNTDDEVSYQDV 255
+V + +D+DD E P + ++++K + + + + +L+ K+ TDD S D
Sbjct: 71 KVTQKHDDDDDFTEAVPENGFVGKKKKSKGKNR--GGSVSFALLS-GKEETDDNESNGDK 127
Query: 254 DSQFLLSFRDDMNAMSRSQK 195
D + ++SF NA ++ +K
Sbjct: 128 DDEPVISFTGKKNASNKGKK 147
>At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)
similar to RNA helicase GB:CAA09204 from [Arabidopsis
thaliana]; identical to cDNA DEAD box RNA helicase, RH13
GI:3776002
Length = 832
Score = 34.3 bits (75), Expect = 0.082
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Frame = -1
Query: 554 IYENDLYFLLPVLQNSKSRERNMPSELHEDSYEDNETIEIEV-------RPQTEDEDDED 396
I E D + LP +++ + + P + + + +E IE E R +DEDDE+
Sbjct: 70 IDEADYHLTLPTIESEITERKQSPEDDDDTNETVDEMIEGEEAEEDGEGRDDEDDEDDEE 129
Query: 395 ERKPFRKYATSERQTKAQQK 336
RK K A ++ K ++K
Sbjct: 130 TRKKKEKKAKRNKEKKKEKK 149
>At4g22320.1 68417.m03227 expressed protein
Length = 238
Score = 31.9 bits (69), Expect = 0.44
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Frame = -1
Query: 695 SHIGMI*TWKIKSKLGNIKRNNGITSETVTENI*TETKNTPVPKKKFIYENDLYFLLPVL 516
SH+ ++ W S+ GN + S + +E+ P P+++F Y + VL
Sbjct: 70 SHL-LLYKWAPLSQNGNGNEDGKSESNSPSEDTVATVAEDP-PRRRF-----KYVPIAVL 122
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDE--RKPFRKYATSERQTKAQ 342
+ K + + D E+++ I+ + + + ED+ DED+ + K A E + K
Sbjct: 123 EEQKKEITEIEED---DKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEVEEKPD 179
Query: 341 QKYTPDEIPYQILNITKQNTDDEVSYQDVD 252
P E Q+ Q+ +++V QD++
Sbjct: 180 INDVPMEDIQQVEEKIVQDDEEKVVRQDLN 209
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Frame = -1
Query: 641 KRNNGITSETVTENI*TETKNTP------VPKKKFIYENDLYFLLPVLQNSKSRERNMPS 480
KR G T ++ TE T TK T P K P + + + + P+
Sbjct: 8 KRGVGTTVKSTTEETATATKETAPATKETAPATKETAPTITKETAPTKETAPATKETAPT 67
Query: 479 ELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDE 321
E S + + +E E+E +E+E++ + E + + +++ +E
Sbjct: 68 RTEEPSLTEQDPENVEEEESEEEEKEEEEKEEEEEEEGEEEEEEEEEEEEKEE 120
>At1g11690.1 68414.m01342 hypothetical protein
Length = 247
Score = 31.9 bits (69), Expect = 0.44
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = -1
Query: 569 PKKKFIYENDLYF-LLPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDE 393
P + F + L F L+P LQ + + EL + ++ ETI +R Q ++ E+
Sbjct: 20 PSENFQEDEFLDFNLVPCLQTELWKAQTRIKELEAEKFKSEETIRCLIRNQRNEK--EET 77
Query: 392 RKPFRKY----ATSERQTKAQQKYTPDEIPYQILNI 297
PF Y + ER+ K + K + +IL++
Sbjct: 78 TNPFVDYLKEKLSKEREEKKRVKAENSRLKKKILDM 113
>At4g10670.1 68417.m01743 transcription elongation factor-related
low similarity to chromatin-specific transcription
elongation factor FACT 140 kDa subunit [Homo sapiens]
GI:5499741
Length = 470
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITK 291
EDS + E ++EV ++EDE E E + SE++++ ++ T E+ + N +
Sbjct: 363 EDSDKGYEPSDVEVESESEDETSESESDDEEEEEDSEQESEEEKGKTWAELEREATNADR 422
Query: 290 QN 285
++
Sbjct: 423 EH 424
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -1
Query: 485 PSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKA 345
PS++ +S ++ET E E + E+ED E E + + +E + +A
Sbjct: 371 PSDVEVESESEDETSESESDDEEEEEDSEQESEEEKGKTWAELEREA 417
>At3g47910.1 68416.m05224 expressed protein low similarity to
nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
GI:189036; contains Pfam profiles PF04780: Protein of
unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1290
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 524 PVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDER 390
P +NSKS+ E H ++ +N + + Q + EDD++ER
Sbjct: 1174 PETENSKSQLSGTNGERHSETLRNNGDVGTKTLRQLQAEDDDEER 1218
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = -1
Query: 494 RNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQ-----KYT 330
R++ +E+ E+ +D E +E+E +P+T E E + + R+ T KA++ +
Sbjct: 222 RDVSAEIAEEKVKDVEALEVEPKPET-SEKVETQLEKARELETEVEVVKAEETAEATEQA 280
Query: 329 PDEIPYQILNITKQNTDDEVSYQD 258
E+ ++ ++ + D E++ +D
Sbjct: 281 KVELEGKLEDVIVEEKDSEINSKD 304
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = -1
Query: 548 ENDLYFLLPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYA 369
END + VL+ +S+ER+M E S D ++ + R + D E ER+ R+
Sbjct: 243 ENDRQYSREVLERDRSKERDMD---REGSIRDRDSEGSKRRDKDSDRRREREREKRREIE 299
Query: 368 TSERQTKAQQK 336
+ + K +++
Sbjct: 300 SDRERRKEKER 310
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 30.7 bits (66), Expect = 1.0
Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYAT---SERQTKA 345
Q S+ R + + + +D + ++ +V+ + EDE +RK +K + ++
Sbjct: 141 QRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVD 200
Query: 344 QQKYTPDEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSRSQKLKFKLGMIQL 165
+++ DE + K+N D++V VD + D+ + R ++ K K +
Sbjct: 201 EKEKLEDEQKSAEIKEKKKNKDEDV----VDEKEKEKLEDEQRSGERKKEKKKKRKSDEE 256
Query: 164 IQHVTEDRVS 135
I V+E+R S
Sbjct: 257 I--VSEERKS 264
>At3g07020.2 68416.m00834 UDP-glucose:sterol glucosyltransferase
(UGT80A2) identical to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 637
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 335 YTP-DEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSRSQKLKFK 183
+TP E P+ + + KQ +SYQ VDS L RD +N + R +KLK +
Sbjct: 332 WTPTSEFPHPLSRV-KQPAGYRLSYQIVDSLIWLGIRDMVNDL-RKKKLKLR 381
>At3g07020.1 68416.m00833 UDP-glucose:sterol glucosyltransferase
(UGT80A2) identical to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 637
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 335 YTP-DEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSRSQKLKFK 183
+TP E P+ + + KQ +SYQ VDS L RD +N + R +KLK +
Sbjct: 332 WTPTSEFPHPLSRV-KQPAGYRLSYQIVDSLIWLGIRDMVNDL-RKKKLKLR 381
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/63 (22%), Positives = 34/63 (53%)
Frame = -1
Query: 509 SKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYT 330
++++E+ S E ++NE IE E E+ +++ K ++ + S+ +TK ++ T
Sbjct: 563 TETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETET 622
Query: 329 PDE 321
++
Sbjct: 623 KEK 625
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/91 (20%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIE-IEVRPQTEDEDDEDERKPFRKYATSERQTKAQQ 339
+ +++++ S E ++NE IE E Q E +++E E K ++ ++S+ +TK ++
Sbjct: 523 KETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKE-KEESSSQEETKEKE 581
Query: 338 KYTPDEIPYQILNITKQNTDDEVSYQDVDSQ 246
++ TK+ ++++ ++ SQ
Sbjct: 582 NEKIEKEESAPQEETKEKENEKIEKEESASQ 612
>At2g22080.1 68415.m02622 expressed protein
Length = 177
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 458 EDNETIEIEVRPQTEDEDDEDERKPFRK 375
+D+E E+E + EDEDDE+ +P +K
Sbjct: 147 DDDEDAEVEEEEEEEDEDDEEALQPPKK 174
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTK 348
+NS++ E+ SE HED D+ + + DE + R+ R+ ++ R T+
Sbjct: 265 RNSRNMEQQNASEAHEDDDNDDNNNRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQ 320
>At4g02810.1 68417.m00381 expressed protein
Length = 271
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 512 NSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERK 387
NS+ E E +D Y+ E E E + E+E++E+E +
Sbjct: 174 NSQDAEEEFEEEDEDDQYDAEEEEEEEEEEEEEEEEEEEEEE 215
>At2g33400.1 68415.m04094 expressed protein
Length = 272
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITK 291
ED Y DNE + E EDE++E+E + + + AQ K P ++ + K
Sbjct: 161 EDYYTDNEN-DYEDDADDEDEEEEEENEQDVAPLLNPVENLAQWKAVKAR-PVKVKRVMK 218
Query: 290 QNTDDEVSYQ 261
+N ++++ Q
Sbjct: 219 ENVEEDMDDQ 228
>At1g32830.1 68414.m04046 hypothetical protein similar to At2g04970,
At2g15200, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 707
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = -1
Query: 635 NNGITSETVTENI*TETKNTPVPKKKFIYENDLYFLLP-----VLQNSKSRERNMPSELH 471
NNG T+ T E+ + K T VPK++ + E+D + V+ + P+E
Sbjct: 497 NNG-TAPTEKESHPLKEKTTEVPKEETVEEHDEHDETEDQEAYVILSDDEDNGTAPTE-K 554
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQIL 303
E + ET E+ + +DED ++ ++ Q+ Q TP + +++
Sbjct: 555 ESQPQKEETTEVPRETKKDDEDVNQTPLSTQEEEITQGQSSLQTPLTPVMLSQEVM 610
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = -1
Query: 518 LQNSKSRERNMPSELHEDSYEDNE-------TIEIEVRPQTEDEDDEDERKPFRKYATSE 360
+ + ++ E + + ED EDNE T ++E DEDD+D Y
Sbjct: 160 IDSDENHEDSDDEYVVEDEDEDNEDDDVKSLTSDVENLIGDSDEDDDDYGDENAYYGGKR 219
Query: 359 RQTKAQQKYTPD 324
++ K Q KYT D
Sbjct: 220 KRGKKQSKYTCD 231
>At4g20280.1 68417.m02962 transcription initiation factor IID
(TFIID) 28 kDa subunit (TAFII-28) family protein similar
to SP|Q15544 Transcription initiation factor TFIID 28
kDa subunit (TAFII-28) (TAFII28) (TFIID subunit
p30-beta) {Homo sapiens}; contains Pfam profile PF04719:
hTAFII28-like protein conserved region
Length = 210
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Frame = -1
Query: 467 DSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATS----ERQTKAQQKYTPDEIPYQILN 300
D ED IEI+ + Q EDE D R+P +K TS E + K + + +E +
Sbjct: 32 DGSEDGR-IEID-QTQDEDERPVDVRRPMKKAKTSVVVTEAKNKDKDEDDEEEEENMDVE 89
Query: 299 ITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSRSQKLK 189
+TK T + + L F +D MSR + +
Sbjct: 90 LTKYPTSSDPAKMAKMQTILSQFTEDQ--MSRYESFR 124
>At3g56150.1 68416.m06241 eukaryotic translation initiation factor 3
subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly
identical to SP|O49160 Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105)
{Arabidopsis thaliana}
Length = 900
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = -1
Query: 512 NSKSRERNMPSELHEDS---YEDNETIEIEVRPQTEDEDDEDE 393
NS ++ ++L+ED Y + +E E +P+ +D+DD+D+
Sbjct: 142 NSMKQKLKKNNKLYEDDINKYREAPEVEEEKQPEDDDDDDDDD 184
>At3g24140.1 68416.m03031 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 Helix-loop-helix
DNA-binding domain
Length = 414
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = -1
Query: 575 PVPKKKFIYENDLYFLLPVLQNSKSRER------NMPSELHEDSYEDNETIEIEVRPQTE 414
PV K N L+P Q S+ N+ E ED +DN+ +++R
Sbjct: 102 PVLNDKIEDHNQTQHLMPSHQTSQEGGECGGNIGNVFLEEKEDQDDDNDNNSVQLRFIGG 161
Query: 413 DEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQ 309
+E+D + + +K S+R+ +A+ T +E+ Q
Sbjct: 162 EEEDRENKNVTKKEVKSKRK-RARTSKTSEEVESQ 195
>At2g42190.1 68415.m05221 expressed protein ; similar to
GP|9826|X07453
Length = 141
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = -1
Query: 527 LPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTK 348
+P + ++ M + E+ ED+E E+ + + EDED+E + ER+ K
Sbjct: 27 IPAYRRRGRPQKPMKDDFEEEEEEDDE--EMVEKMEVEDEDEEIDDGSVTSKDLKERKRK 84
Query: 347 AQQKYTPDEIPYQILNITKQNTDD 276
D + +K NTDD
Sbjct: 85 MSNGSNTDLTEEENGLGSKPNTDD 108
>At1g02730.1 68414.m00226 cellulose synthase family protein similar
to cellulose synthase catalytic subunit [gi:13925881]
from Nicotiana alata, cellulose synthase-4 [gi:9622880]
from Zea mays
Length = 1181
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 440 EIEVRPQTEDEDDEDERKPFRKYATSE 360
+I P+TE+ED+EDE KP + S+
Sbjct: 207 DINDDPETEEEDEEDEAKPLPQMGESK 233
>At5g61070.1 68418.m07663 histone deacetylase family protein (HDA18)
identical to HDA18 [Arabidopsis thaliana] GI:21105769;
similar to SP|Q9UBN7 Histone deacetylase 6 (HD6) {Homo
sapiens}; contains Pfam profile PF00850: Histone
deacetylase family
Length = 682
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -1
Query: 518 LQNSKSRER--NMPSELHEDSYEDNETIEIE-VRPQTEDEDDEDERKPFRKYATSERQTK 348
LQ +SR R N ++ YED + E+E + P+ ++ D +E +PF+ + +
Sbjct: 602 LQEDRSRSRVGNGSFAFSQEFYEDMDLDELEPLSPEFNEDMDSEELEPFQ--VIKKNMER 659
Query: 347 AQQKYTPD 324
+ +K+ D
Sbjct: 660 SHKKFIKD 667
>At5g03710.1 68418.m00331 hypothetical protein
Length = 81
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKA 345
+ + E E E+ E+ E E E + E+E++E+E + + ER+ +A
Sbjct: 18 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDREREERA 74
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYA 369
+ + E E E+ E+ E E E + E+E++ED + R +A
Sbjct: 28 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDREREERAFA 76
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/60 (20%), Positives = 28/60 (46%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
+ + E E E+ E+ E E E + E+E++E+E + + E + + +++
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = -1
Query: 497 ERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDE 321
E E E+ E+ E E E + E+E++E+E + + E + + +++ +E
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 64
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = -1
Query: 506 KSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTP 327
+ E E E+ E+ E E E + E+E++E+E + + E + + +++
Sbjct: 7 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 66
Query: 326 D 324
D
Sbjct: 67 D 67
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/60 (20%), Positives = 28/60 (46%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
+ + E E E+ E+ E E E + E+E++E+E + + E + + +++
Sbjct: 7 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 66
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = -1
Query: 497 ERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDE 321
E E E+ E+ E E E + E+E++E+E + + E + + +++ +E
Sbjct: 7 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/65 (20%), Positives = 29/65 (44%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
+ + E E E+ E+ E E E + E+E++E+E + + E + + ++
Sbjct: 8 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED 67
Query: 335 YTPDE 321
+E
Sbjct: 68 REREE 72
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = -1
Query: 551 YENDLYFLLPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDE 393
Y L +P + + ++ S + E+S +D + E EV+P+ E+E++EDE
Sbjct: 34 YLESLGAKIPTGVHEEDKDTKPRSFVVEESDDDMDETE-EVKPKVEEEEEEDE 85
>At3g17160.1 68416.m02189 expressed protein
Length = 165
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/88 (21%), Positives = 36/88 (40%)
Frame = -1
Query: 497 ERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEI 318
E N+ E E ED++ + + EDEDDE+ + + + + +
Sbjct: 45 EANVEEEDDEAENEDDDDDDDDDDDDDEDEDDEEGEEDLGTEYLVRPVGEVEDEDDASDF 104
Query: 317 PYQILNITKQNTDDEVSYQDVDSQFLLS 234
+ + ++ D+E+ DVD LS
Sbjct: 105 DPEENGLDEEEGDEEIEEDDVDEDISLS 132
>At1g65440.1 68414.m07424 glycine-rich protein
Length = 1647
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 416 EDEDDEDERKPFRKYATSERQTKAQQKYTPDE 321
EDE++E+E RK + ERQ K +++ DE
Sbjct: 56 EDEEEEEEEDEERKDSDEERQKKKKKRKKKDE 87
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
+ K +ER E ++ E EI + E+EDD+D R+ + + A ER+ + ++
Sbjct: 488 EREKEKERQYEKEKEKEK-ERKRKKEIRYEEE-EEEDDDDSRRRWHRAALDERRRRQLRE 545
Query: 335 YTPD 324
D
Sbjct: 546 KEDD 549
>At1g55380.1 68414.m06334 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 530 LLPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDE 393
LLP +K + M S D ED++ E ++ + ED+ D+D+
Sbjct: 91 LLPKFDVTKIPKNWMDSSSSSDESEDDDDDEKSIKEECEDDGDDDD 136
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -1
Query: 509 SKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDED-ERKPFRKYATSE 360
SK R+R+ P E E++ +D+E + + + E+DE + P ++ T E
Sbjct: 174 SKKRKRSEPEETKEETEDDDEESKRRKKEENVVENDEGVQETPVKETETKE 224
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = -1
Query: 644 IKRNNGITSETVTENI*TETKNTPVPKKKFIYENDLYFLLPVLQNSKSRERNMPSELHED 465
+K + + + V E + V +++ + E D V + K + ++ E +D
Sbjct: 110 VKETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAVIEDGVKEKKKKKSKSKSVEADDD 169
Query: 464 ----SYEDNETIEIEVRPQTEDEDDEDERK 387
S + + E + +TED+D+E +R+
Sbjct: 170 KEKVSKKRKRSEPEETKEETEDDDEESKRR 199
>At4g23880.1 68417.m03433 expressed protein
Length = 199
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -1
Query: 572 VPKKKFIYENDLYFLLPVLQNSKSRERNMPSELHEDSYEDNETIEIEVR-PQTEDEDDED 396
V + K IY +DL LP+ ++S+E ++ S + + I+ +R + E+E+DE
Sbjct: 19 VLEAKPIYRDDLDITLPL---NESKEVSVESTKKSRCLQRAKRIDKSLRFEEGEEEEDEQ 75
Query: 395 ERKPFRK 375
+KP K
Sbjct: 76 NKKPLAK 82
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -1
Query: 506 KSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTP 327
K +++ E H+D D E + + +D +D+DE+K + Y + + K + Y
Sbjct: 186 KKKKKEQYKEHHDDDDYD------EKKKKKKDYNDDDEKKKKKHYNDDDDEKKKKHNYND 239
Query: 326 DE 321
D+
Sbjct: 240 DD 241
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = -1
Query: 509 SKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYT 330
SK+RE+ E + E+ + + + + + +E D +ERK +K R KA++K
Sbjct: 1007 SKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKS-KKEKEESRDLKAKKKEE 1065
Query: 329 PDEIPYQILNITKQNTDDEVSYQD 258
+ + N + +D+ ++D
Sbjct: 1066 ETKEKKESENHKSKKKEDKKEHED 1089
>At2g21540.1 68415.m02563 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; contains Pfam PF00650
: CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
N-terminus
Length = 548
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = -1
Query: 641 KRNNGITSETVTENI*TETKNTPVPKKKFIYENDLYFLLPVLQNSKSRERNMPSELHEDS 462
K + I +T++ + T K+ K KF EN + +P++ + + P+ LH+ +
Sbjct: 342 KTLSNIEEKTISVDENTTMKSDSFAKNKFDAENTKF--IPMIDKTVNAS-TWPTNLHKSN 398
Query: 461 YEDNETIEIEVRP 423
Y + E + V+P
Sbjct: 399 YPEPEDLYSAVKP 411
>At1g80810.1 68414.m09481 expressed protein similar to
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]; similar
to bimD (GI:168025) [Emericella nidulans]
Length = 826
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/79 (20%), Positives = 36/79 (45%)
Frame = -1
Query: 509 SKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYT 330
+K E+ P+ E ED+E+ E +T+D +D++E + + + +++
Sbjct: 740 TKEEEKQYPNSEGESEGEDSESEEEPKWRETDDMEDDEEEEEEEIDHMEDEAEEEKEEVD 799
Query: 329 PDEIPYQILNITKQNTDDE 273
E + I K+ ++E
Sbjct: 800 DKEASANMSEIEKEEEEEE 818
>At1g66070.1 68414.m07499 translation initiation factor-related
similar to Eukaryotic translation initiation factor 3
subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j)
(Swiss-Prot:O75822) [Homo sapiens]
Length = 226
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 488 MPSELH-EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
+P+++ + +++D + E E++ ED+DDE + P A + KA K
Sbjct: 12 LPAKVELKSNWDDEDVDENEIKDSWEDDDDEPAQPPVINPAPEKAPKKAAPK 63
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = -1
Query: 482 SELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYT 330
SE+ ++S+ E++E++ + +DE+ ED+ + +T + + + T
Sbjct: 723 SEIKDESHGKEESVEVKSQETVQDENTEDKHDVLKVPSTESEKYQGNEPET 773
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = -1
Query: 515 QNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQK 336
+ K + ++ E S + + + E P+T +E + E+K RK+ E + A++K
Sbjct: 461 KKKKKADDEEEAKTEEPSKKKSNKKKTEAEPETAEEPAKKEKKKKRKHEEEETEMPAKKK 520
>At1g79180.1 68414.m09232 myb family transcription factor (MYB63)
similar to myb-related protein GI:1370139 from
[Lycopersicon esculentum]
Length = 294
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -1
Query: 428 RPQTEDEDDEDERKPFRKYATSE---RQTKAQQKYTPDE 321
R TE+E DEDE K + K+ SE + QQ+Y +E
Sbjct: 241 RATTEEESDEDEVKKWFKHLESELGLEEDDNQQQYKEEE 279
>At5g61940.1 68418.m07775 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1094
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/100 (18%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = -1
Query: 509 SKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQT---KAQQ 339
S + E ++ +EL ++ + E + + +PQ++ D ++KP ++S +T K
Sbjct: 712 SDAAEADLLNELEKEKLQSKEKPQSKEKPQSKKRRDRSKKKPSTSISSSLDKTVEHKPSV 771
Query: 338 KYTPDEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDM 219
P+ + I + + + E + Q +S + ++
Sbjct: 772 NLKPESTSSSLRTIEEGSMEPEDALASETGQLKISSKTEI 811
>At5g56950.1 68418.m07109 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 374
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRK 375
ED +++E + E + E+EDDEDE + K
Sbjct: 311 EDDIDEDEDEDEEDEDEDEEEDDEDEEEEVSK 342
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 485 PSELHEDSYEDNETIEIEVRPQTEDEDDED 396
P E ED D E E E ED+DD+D
Sbjct: 149 PGEGSEDKSSDEELSEEEYGSDNEDDDDDD 178
>At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recognition
Nexus) repeat-containing protein contains Pfam profile
PF02493: MORN repeat
Length = 871
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -1
Query: 548 ENDLYFLLPVLQNSK--SRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKP 384
E D L+PV + K + + + E+ Y+D++ + + +D+DD+D+ P
Sbjct: 650 EEDEDVLVPVYKEEKVVTAKEKIQENKQEEKYKDDDDEDDDDGDDDDDDDDDDDLGP 706
>At3g49470.1 68416.m05407 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 217
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = -1
Query: 419 TEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQNTDDEVSYQDVDSQFL 240
TE D + E+ P A + ++K DE + + + + DD+ +D D+Q +
Sbjct: 9 TESADGQPEQPPVTAIAE-----ELEKKLQTDEPIVEDVKDDEDDDDDDEEEEDDDAQGV 63
Query: 239 LSFRDDMNAMSRSQKLKFKLGM 174
+ +S+K KLGM
Sbjct: 64 SGSSKQSRSEKKSRKAMLKLGM 85
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 28.3 bits (60), Expect = 5.4
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = -1
Query: 518 LQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDD------EDERKPFRKYATSER 357
++ S +R SE ED E E R + DEDD ED+R+ RK +R
Sbjct: 205 MKKRSSHKRRSLSE-SEDEEEGRSKRRKERRGRKRDEDDSDESEDEDDRRVKRKSRKEKR 263
Query: 356 QTKAQQKYTPDEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSR 204
+ ++++ ++ D + +Q ++V+ DS+ +S DD++ + R
Sbjct: 264 RRRSRRNHSDDSDSESSEDDRRQKRRNKVAASS-DSEANVS-GDDVSRVGR 312
>At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-10)
/ HD-ZIP transcription factor 10 / homeobox protein
(GLABRA2) identical to homeobox protein (GLABRA2)
(homeobox-leucine zipper protein ATHB-10) (HD-ZIP
protein ATHB-10) GB:P46607 [Arabidopsis thaliana]
Length = 747
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -1
Query: 416 EDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQNTDDEVSYQDVDSQFLL 237
+DE++E+E T++R+ K ++T D+I + + DE Q + Q L
Sbjct: 81 DDEEEEEEDGAAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGL 140
Query: 236 SFR 228
+ R
Sbjct: 141 APR 143
>At1g67140.1 68414.m07638 expressed protein
Length = 2158
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/85 (25%), Positives = 42/85 (49%)
Frame = -1
Query: 488 MPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQ 309
MP+ ++ S ++ T E E + +D+DD D + F +T+ ++++ + +E P
Sbjct: 1933 MPTSFNQVSTVESGTDEEEEEEEDDDDDDWDTFQSF-PASTNLEGSESKTESVAEEEP-- 1989
Query: 308 ILNITKQNTDDEVSYQDVDSQFLLS 234
L DDE + ++ D Q L S
Sbjct: 1990 DLPGRSSIQDDESNAEETDDQHLAS 2014
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -1
Query: 509 SKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTK 348
++ R ++ E ED+ ED E R EDE++E+ + + + S R+ K
Sbjct: 541 ARGRGKDSEDEYEEDAEEDEEERGKSNRYSDEDEEEEEGGRAEKDHRGSGRKRK 594
>At5g47210.1 68418.m05821 nuclear RNA-binding protein, putative
similar to nuclear RNA binding protein GI:6492264 from
[Arabidopsis thaliana]
Length = 357
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Frame = -1
Query: 455 DNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQ------QKYTPDEIPYQILNIT 294
+ T E+E P E + EDE +K T+E + + + ++ T +E +
Sbjct: 185 EEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREMTLEEYEKILEEKK 244
Query: 293 KQNTDDEVSYQDVDSQFLLSFRDDMNAMSRSQKLKFKLG 177
K +V + VD++ S + N + +++ KLG
Sbjct: 245 KALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLG 283
>At5g28080.1 68418.m03391 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 406
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/82 (17%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -1
Query: 461 YEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQNT 282
Y +ET+E E ++D+DE + +++ + + K +++ D + ++ + K+
Sbjct: 244 YNGDETVESHEIDLLEFQNDDDEEEEDKRFGSVDISIKGKRRDNGDGLFLRLKTVNKEGC 303
Query: 281 DDEVSYQ-DVDSQFLLSFRDDM 219
+ + D+++ +S +M
Sbjct: 304 VRNIYFPFDIETDTAISVAREM 325
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 467 DSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYT 330
DS E + E + EDE++EDE + K + ++K+ K+T
Sbjct: 313 DSESHGEEGDNENEDEEEDEEEEDEEEKQEKKEDKDDESKSAIKWT 358
>At4g31610.1 68417.m04490 transcriptional factor B3 family protein /
reproductive meristem protein 1 (REM1) similar to
reproductive meristem gene 1 from [Brassica oleracea
var. botrytis] GI:3170424; contains Pfam profile
PF02362: B3 DNA binding domain; identical to cDNA
reproductive meristem protein 1 (REM1) GI:13604226
Length = 517
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = -1
Query: 557 FIYENDLYFLLPVLQNSKSRE-RNMPSE--LHEDSYEDNETIEIEVRPQT-EDEDDEDER 390
F + D F + V+ S S + RN S + ED+Y D + ++ + Q ED+DD+D+
Sbjct: 76 FKHHGDEVFHVAVVSPSVSGDIRNASSSQVITEDTYIDVDDVDDDDYGQDDEDDDDDDDE 135
Query: 389 KPFRKYATSERQTKAQQ 339
SE+ K Q+
Sbjct: 136 GEDNIENISEKTDKRQE 152
>At3g51150.1 68416.m05601 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1025
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEI-PYQILNIT 294
++S ET E + + +E +E+E + ++ ++ QTK +K P ++ P +L++T
Sbjct: 578 KNSRPPTETAEEKEEKEETEEKEEEEEERVKEVSSVSIQTK--EKSGPIKVSPRCVLSLT 635
Query: 293 KQNTDDEVS 267
++ DE S
Sbjct: 636 DESFPDESS 644
>At3g24560.3 68416.m03086 expressed protein contains Pfam profile
PF01171: PP-loop family
Length = 456
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 449 RCLRNYLRVIPMACSVREICCFVKPVTKNKG 541
+ L NY+R IP S+ C++ P +KG
Sbjct: 177 KLLLNYIRAIPCRTSLTAAGCYLSPAPGSKG 207
>At3g24560.2 68416.m03084 expressed protein contains Pfam profile
PF01171: PP-loop family
Length = 660
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 449 RCLRNYLRVIPMACSVREICCFVKPVTKNKG 541
+ L NY+R IP S+ C++ P +KG
Sbjct: 381 KLLLNYIRAIPCRTSLTAAGCYLSPAPGSKG 411
>At3g24560.1 68416.m03085 expressed protein contains Pfam profile
PF01171: PP-loop family
Length = 462
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 449 RCLRNYLRVIPMACSVREICCFVKPVTKNKG 541
+ L NY+R IP S+ C++ P +KG
Sbjct: 183 KLLLNYIRAIPCRTSLTAAGCYLSPAPGSKG 213
>At3g10800.1 68416.m01300 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; contains similarity to TGACG-sequence specific
DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana
tabacum]
Length = 675
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = -1
Query: 509 SKSRERNMPS--ELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSE--RQTKAQ 342
SK ++ N S EL Y+ ++ + V E +DD+D+RK R+ E + ++ +
Sbjct: 153 SKRKKENGDSSGELRSCKYQKSD--DKSVATNNEGDDDDDKRKLIRQIRNRESAQLSRLR 210
Query: 341 QKYTPDEIPYQI--LNITKQNTDDEVSY 264
+K +E+ ++ +N T + +++Y
Sbjct: 211 KKQQTEELERKVKSMNATIAELNGKIAY 238
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/62 (19%), Positives = 31/62 (50%)
Frame = -1
Query: 506 KSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTP 327
+++++ +P E ++ + E+ V+P++ + + E KP + +TK + K P
Sbjct: 96 ETKQKVVPEESKQEVPPEESKREVVVQPESAKPETKSESKPETTKPETTSETKPETKAEP 155
Query: 326 DE 321
+
Sbjct: 156 QK 157
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = -1
Query: 479 ELHEDSYEDNETIEIEVRPQTEDEDDEDER----KPFRKYAT-SERQTKAQQKY 333
+ E+ DN+ + E EDEDD+D R F++ T +R+ + QK+
Sbjct: 413 DAEEEDDSDNDLLRFEDEDDDEDEDDDDLRDMIVSQFKEDPTDKDRRNELHQKW 466
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = -1
Query: 464 SYEDNETIEIEVRPQTEDE 408
S++DN+T+ ++V+P+ E E
Sbjct: 332 SFQDNKTVHVKVKPEAESE 350
>At1g55050.1 68414.m06288 expressed protein ; expression supported
by MPSS
Length = 914
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 527 LPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTE 414
L + NS + L+ + E+NE IEI+ RP+TE
Sbjct: 608 LDQITNSHPKLHVDSMNLNTNQSEENENIEIQERPETE 645
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -1
Query: 590 ETKNTPVPKKKFIYENDLYFLLPVLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTED 411
E+ +TP +K+ + DL ++ + ++ HE+ E + T+D
Sbjct: 267 ESSDTPAKRKRQTKKRDLPSDTEEGKDEGDADSEGTNDPHEEDDAAPEEESDHEKTDTDD 326
Query: 410 EDDEDE-RKPFRKYATSER 357
E DE E KP +K ++S++
Sbjct: 327 EKDEVEVEKPSKKKSSSKK 345
>At5g47090.1 68418.m05806 expressed protein
Length = 310
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = -1
Query: 467 DSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITKQ 288
+ E++E E E + E+E+DE+ + P ++S + ++K T P ++ ++ Q
Sbjct: 202 EKMEESEEEEEEESEEEEEEEDEEAKNPTEASSSSLNGKEQKEKATTVLPPEEMQDMMDQ 261
Query: 287 NT 282
T
Sbjct: 262 FT 263
>At5g39040.1 68418.m04724 ABC transporter (TAP2) TAP-like ABC
transporter, Rattus norvegicus, EMBL:AB027520; identical
to cDNA transporter associated with antigen
processing-like protein (TAP2); GI:19335723
Length = 644
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 30 DRALYSALNCSFGRVFGVFLPNKGSLDVSTL 122
+ + A N FGRVF + P+ G L + T+
Sbjct: 46 EHGVVEAANVGFGRVFALAKPDAGKLVIGTI 76
>At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1072
Score = 27.5 bits (58), Expect = 9.4
Identities = 26/109 (23%), Positives = 46/109 (42%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITK 291
+++Y E E +V Q E+D+DE + + A S+ + A PDE P +
Sbjct: 12 DEAYSSEE--EEQVNDQANVEEDDDELEAVARSAGSDEEDVA-----PDEAPVSDDEVVP 64
Query: 290 QNTDDEVSYQDVDSQFLLSFRDDMNAMSRSQKLKFKLGMIQLIQHVTED 144
D E +D + + +S R+ + K K+ I Q+ + D
Sbjct: 65 VEDDAEEDEED-EEKAEISKREKARLKEMQKMKKQKIQQILDSQNASID 112
>At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1069
Score = 27.5 bits (58), Expect = 9.4
Identities = 26/109 (23%), Positives = 46/109 (42%)
Frame = -1
Query: 470 EDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNITK 291
+++Y E E +V Q E+D+DE + + A S+ + A PDE P +
Sbjct: 12 DEAYSSEE--EEQVNDQANVEEDDDELEAVARSAGSDEEDVA-----PDEAPVSDDEVVP 64
Query: 290 QNTDDEVSYQDVDSQFLLSFRDDMNAMSRSQKLKFKLGMIQLIQHVTED 144
D E +D + + +S R+ + K K+ I Q+ + D
Sbjct: 65 VEDDAEEDEED-EEKAEISKREKARLKEMQKMKKQKIQQILDSQNASID 112
>At5g09850.1 68418.m01139 transcription elongation factor-related
low similarity to SP|P10712 Transcription elongation
factor S-II (Transcription elongation factor A) {Mus
musculus}
Length = 353
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = -1
Query: 476 LHEDSYEDNE-----TIEIEVRPQTEDEDDEDERKPFRKYATSERQT--KAQQKYTPDEI 318
+HE++ E++E E EVR ++ + +D+D+ PF E+++ + ++K ++
Sbjct: 80 VHEETEEEDEEGVTAAAEEEVREKSVNVEDDDDFDPFAGLFDDEQKSIVEIKEKLEDPDL 139
Query: 317 PYQILNITKQNTDD-EVSYQ 261
+ L QN +D ++++Q
Sbjct: 140 SEESLVELLQNLEDMDITFQ 159
>At5g09460.1 68418.m01095 expressed protein
Length = 326
Score = 27.5 bits (58), Expect = 9.4
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = -1
Query: 521 VLQNSKSRERNMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQ 342
+LQ+ SE+HED+ E N + ++D+D++D +T
Sbjct: 147 ILQHEDHENGEEDSEMHEDTEEINALL------YSDDDDNDDWESDDEVMSTG------- 193
Query: 341 QKYTPDEIPYQILNITKQNTDDEVSYQD---VDSQFLL--SFRDDMNAMSRSQKLK 189
++P + Q NIT + D+ S D + Q LL S+RD ++ + K+K
Sbjct: 194 --HSPFTVEQQACNITTEELDETESTVDGPLLKRQKLLDHSYRDSSPSLVGTTKVK 247
>At4g35335.1 68417.m05021 nucleotide-sugar transporter family
protein similar to SP|O77592 UDP N-acetylglucosamine
transporter (Golgi UDP-GlcNAc transporter) {Canis
familiaris}, SP|P78382 CMP-sialic acid transporter {Homo
sapiens}; contains Pfam profile PF04142:
Nucleotide-sugar transporter
Length = 302
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = -1
Query: 656 KLGNIKRNNGITSETVTENI*TETKNTPVPKKKFIYENDLYFLL 525
+ G I +N G+T + E K P+P ++++N L + +
Sbjct: 89 RAGKIWKNEGVTDDNRLSTTFDEVKVFPIPAALYLFKNLLQYYI 132
>At4g17620.1 68417.m02636 glycine-rich protein
Length = 544
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 467 DSYEDNETIEIEVRP-QTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIP 315
+SY N+ E V P + E+E++EDE+ F +T A Y+ +P
Sbjct: 88 ESYRSNDNGESGVYPYEEEEEEEEDEKDLFGSDNEEYTKTPAISTYSIPVLP 139
>At4g11560.1 68417.m01853 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 587
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 470 EDSYE-DNETIEIEVRPQTEDEDDEDERK 387
ED E D++ E E P+ E+E+DE+E +
Sbjct: 68 EDMAEGDDDQAEEETNPEAEEEEDEEEEE 96
>At4g10770.1 68417.m01757 oligopeptide transporter OPT family
protein similar to oligopeptide transporter Opt1p
[Candida albicans] GI:2367386; contains Pfam profile
PF03169: OPT oligopeptide transporter protein
Length = 766
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 530 LLPVLQNSKSRER-NMPSELHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYA 369
+LP+L N K + S S +ET ++ + E+E++E+E P R+ A
Sbjct: 7 VLPLLTNPKDLTNPSYASSSSSSSEPRDETEDLLLPISDENEEEEEENSPIRQVA 61
>At4g03565.1 68417.m00490 expressed protein
Length = 263
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = -1
Query: 518 LQNSKSRERNMPS--ELHEDSYEDN--ETIEIEVRPQTEDEDDEDERKPFRKYATSERQ 354
+ +S +RE + S E + YE N E E + E++DD+D+ + R+ +ER+
Sbjct: 23 ISDSDTREDDYSSDGEKEGEDYESNGEEGDEYDGESNEEEDDDDDDNESDREEGDTERE 81
>At2g45460.1 68415.m05654 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 915
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = -1
Query: 506 KSRERNMPSE--LHEDSYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKY 333
K ++++ SE E+++ +E+E+ D D E +R + R+T+ + Y
Sbjct: 477 KRLQKDLDSEKAAREEAWAKVSALELEISAAVRDLDVERQRHRGARERIMLRETQMRAFY 536
Query: 332 -TPDEIPYQILNITKQNTDDEVSYQDVDSQFLLSFRDDMNAMSRS 201
T +EI +Q + + +D D+ S D+N ++RS
Sbjct: 537 STTEEISALFAKQQEQLKTMQRTLEDEDNCDNTSLDIDLNPINRS 581
>At2g25830.1 68415.m03099 YebC-related contains Pfam profile
PF01709: Domain of unknown function; contains TIGRFAM
TIGR01033: conserved hypothetical protein; similar to
YebC (GI:5771432) [Legionella pneumophila]
Length = 331
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Frame = -1
Query: 425 PQTEDEDDEDERKPFRKYATS-ERQTKAQQKYTPDEIPY------QILNITKQNTDDEVS 267
P ED+ DED + + K TS E + K + + + ++L +T DDE
Sbjct: 248 PTYEDDTDEDREERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAM 307
Query: 266 YQDVDSQFLLSFRDDMNAMSRSQK 195
+ + L DD++A+ QK
Sbjct: 308 ELNKELMQKLLELDDVDAVYIDQK 331
>At2g20950.3 68415.m02473 expressed protein
Length = 505
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 419 TEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNI 297
++DEDD + F + AT R TP YQI ++
Sbjct: 234 SDDEDDNNSTYLFPEIATGRRSRGVSGSSTPVHYKYQITSV 274
>At2g20950.2 68415.m02472 expressed protein
Length = 503
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 419 TEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNI 297
++DEDD + F + AT R TP YQI ++
Sbjct: 232 SDDEDDNNSTYLFPEIATGRRSRGVSGSSTPVHYKYQITSV 272
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 419 TEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIPYQILNI 297
++DEDD + F + AT R TP YQI ++
Sbjct: 249 SDDEDDNNSTYLFPEIATGRRSRGVSGSSTPVHYKYQITSV 289
>At1g08340.1 68414.m00922 rac GTPase activating protein, putative
similar to rac GTPase activating protein 1 GI:3695059
from [Lotus japonicus]; contains Pfam profile PF00620:
RhoGAP domain
Length = 331
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 479 ELHEDSYEDNETIEIEVRPQTEDEDDEDE 393
E +D+ E+ E E E + EDED+E+E
Sbjct: 247 EKEKDNEEEEEDEEEEEEEEDEDEDEEEE 275
>At1g07620.1 68414.m00817 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 1016
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 491 NMPSELHED-SYEDNETIEIEVRPQTEDEDDEDERKPFRKYATSERQTKAQQKYTPDEIP 315
++P L ED + E+N + E ++ D+DD ++ R+ + D+I
Sbjct: 687 DLPGSLVEDPASEENSDVHQETMSES-DQDDTEQESLTRQLGMPKEADFEDDDEEIDQIR 745
Query: 314 YQILNITKQ 288
Y + +T+Q
Sbjct: 746 YNVAELTQQ 754
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,556,258
Number of Sequences: 28952
Number of extensions: 298320
Number of successful extensions: 1840
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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