Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31047
(729 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 46 2e-05
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 46 2e-05
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 46 2e-05
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 46 2e-05
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 46 2e-05
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 46 2e-05
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 44 1e-04
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 43 2e-04
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 43 3e-04
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2) 32 0.55
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_31098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 6 DVVKRRPVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 62 DVVKRRPVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 630 DVVKRRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 41 DVVKRRPVNCNTTHYRANW 59
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 3 DVVKRRPVNCNTTHYRANW 21
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 43 DVVKRRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 1881 DVVKRRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 41 DVVKRRPVNCNTTHYRANW 59
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 3 DVVKRRPVNCNTTHYRANW 21
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 35 DVVKRRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 84 DVVKRRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 62 DVVKRRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 73 DVVKRRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 49 DVVKRRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRANW 672
D VKRRPVNCNTTHYRANW
Sbjct: 73 DVVKRRPVNCNTTHYRANW 91
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 651 TRGGARYPIRPIVSRITIHWPSFY 722
T GGA PIRPIVSRITIHWP+FY
Sbjct: 34 TDGGA--PIRPIVSRITIHWPAFY 55
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRAN 675
DG KRRPVNCNTTHYRAN
Sbjct: 80 DGEKRRPVNCNTTHYRAN 97
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3
Query: 651 TRGGARYPIRPIVSRITIHWPSFY 722
T GGA PIRPIVS ITIHWPSFY
Sbjct: 36 TVGGA--PIRPIVSHITIHWPSFY 57
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2
Query: 728 DGVKRRPVNCNTTHYRAN 675
D VKRRPVNCNTTHYRAN
Sbjct: 23 DVVKRRPVNCNTTHYRAN 40
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 675 IRPIVSRITIHWPSFY 722
IRPIVSRITIHWPSFY
Sbjct: 18 IRPIVSRITIHWPSFY 33
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 675 IRPIVSRITIHWPSFYTV 728
+RP+VSRITIHW SFY V
Sbjct: 33 LRPVVSRITIHWTSFYNV 50
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 34.7 bits (76), Expect = 0.078
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 681 PIVSRITIHWPSFYTV 728
P +SRITIHWPSFY V
Sbjct: 77 PYMSRITIHWPSFYNV 92
>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
Length = 98
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 690 SRITIHWPSFYTV 728
SRITIHWPSFY V
Sbjct: 2 SRITIHWPSFYNV 14
>SB_31098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = -2
Query: 620 HLLIYLYFIKNKIFVVYNNVFCFISILLFNIASGLLIMAAYGSALS 483
++L L F++NK +V+C +++ L +++ G+L + Y S L+
Sbjct: 181 NILTILTFVRNKRKKRKKSVYCLMNLALSDLSVGILTIPLYVSYLA 226
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,184,438
Number of Sequences: 59808
Number of extensions: 312669
Number of successful extensions: 855
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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