Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31044
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0423 + 23349588-23350084,23350133-23350346                       29   2.7  
03_05_0469 + 24640925-24641081,24641292-24641644,24641870-246420...    29   4.7  
03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574           29   4.7  
01_06_0272 - 28065896-28065991,28066069-28066227,28066918-280669...    29   4.7  
07_03_1107 - 24024387-24024497,24025799-24026410                       28   6.2  

>11_06_0423 + 23349588-23350084,23350133-23350346
          Length = 236

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +3

Query: 306 EKTNQQFTVTELEDPNASTDSQKPECKPTKTRVRGGKACAGQTIFEEQFDSLDENVWQI 482
           E    Q  +T  E+  A  DS +P C    ++     + AG++  E   D LDE +  I
Sbjct: 11  ESQFNQCAITAEEEAAALPDSTEPPCTNVASQDEESGSAAGESESESDSDDLDEVIADI 69


>03_05_0469 +
           24640925-24641081,24641292-24641644,24641870-24642043,
           24642382-24642506,24643011-24643059,24643741-24643899,
           24644037-24644219
          Length = 399

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 530 VGHEGVFGVINRYILLDLPNVFVQ 459
           + H+GV G IN + L  LPNV V+
Sbjct: 318 ISHDGVIGTINNFRLGRLPNVQVE 341


>03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574
          Length = 602

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 530 VGHEGVFGVINRYILLDLPNVFVQ 459
           + H+GV G IN + L  LPNV V+
Sbjct: 376 ISHDGVIGTINNFRLGRLPNVQVE 399


>01_06_0272 -
           28065896-28065991,28066069-28066227,28066918-28066966,
           28067350-28067474,28067834-28068004,28068222-28068571,
           28069322-28069478
          Length = 368

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 530 VGHEGVFGVINRYILLDLPNVFVQ 459
           + H+GV G IN + L  LPNV V+
Sbjct: 316 ISHDGVIGTINNFRLGRLPNVQVE 339


>07_03_1107 - 24024387-24024497,24025799-24026410
          Length = 240

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -1

Query: 487 CSICQTFSSRES---NCSSNIVCPAHALPPRTL 398
           C IC  FSSR +   +CS ++   +H L  RTL
Sbjct: 206 CPICDVFSSRCAAYLDCSCSVTALSHRLKTRTL 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,923,112
Number of Sequences: 37544
Number of extensions: 397754
Number of successful extensions: 1254
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)