Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31044
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 30 2.1
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 30 2.1
SB_5694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_31296| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 29 4.8
SB_31231| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_21807| Best HMM Match : JmjC (HMM E-Value=4.2) 29 4.8
SB_21500| Best HMM Match : GIY-YIG (HMM E-Value=4.4) 29 4.8
SB_51805| Best HMM Match : DUF755 (HMM E-Value=6.8) 29 4.8
SB_39194| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 29 4.8
SB_37265| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_12743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_11630| Best HMM Match : GIY-YIG (HMM E-Value=9.1) 29 4.8
SB_7666| Best HMM Match : Cps15 (HMM E-Value=0.93) 29 4.8
SB_47549| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_21241| Best HMM Match : ErmC (HMM E-Value=1.1) 28 6.3
SB_51868| Best HMM Match : GIY-YIG (HMM E-Value=5.7) 28 8.3
SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2) 28 8.3
SB_21374| Best HMM Match : GIY-YIG (HMM E-Value=4) 28 8.3
SB_20299| Best HMM Match : JmjC (HMM E-Value=4.1) 28 8.3
SB_38851| Best HMM Match : RVT_1 (HMM E-Value=9.8e-20) 28 8.3
SB_29418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_23074| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_3833| Best HMM Match : Borrelia_orfA (HMM E-Value=1.2) 28 8.3
SB_1343| Best HMM Match : IBB (HMM E-Value=2.3) 28 8.3
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 306 EKTNQQFTVTELEDPNASTDSQKPECKPTKTR 401
E N Q ++ PN ST S K EC+ TK +
Sbjct: 807 ESENNQKDNSQSSSPNGSTSSSKDECESTKEK 838
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 288 INKKIYEKTNQQFTVT--ELEDPNASTDSQKPECKPTKTRV 404
+ KK YEK +QFT T EL+D D+ + E K K +
Sbjct: 417 LEKKKYEKVKEQFTTTEQELKDLKKEHDALQSESKKDKAEL 457
>SB_5694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1113
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 949 TKQIIDNHNKRIITASSATEITSLAPTTTNNKTCNCRQKDT 989
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/142 (19%), Positives = 54/142 (38%)
Frame = +2
Query: 26 IYKNIVRSNARCENTSFSPERTSNIRSRCPQNDTVRVPRQLEP*TGQHQRRDTECRGTGS 205
+ K R N E + E+ + R R + RV ++ E + +R + E
Sbjct: 491 VNKKKERLNKEKEQLNKEKEQLNKERKRL-NKERKRVNKERERLNKEKERLNKETERLDK 549
Query: 206 SQRPMGVRRARS*TKSQXXXXXXXXXXNQQENIRENKPTVHRNRARRS*CKHRFSETRM* 385
++ + R R K + ++E + + + + R R + + R ++ R
Sbjct: 550 TRERLNKERKRLNKKKERLNKVRKRLNKEKERLNKEMERLDKTRERLNKERKRLNKERKR 609
Query: 386 ANKDESARRQSVCRTNNIRGAI 451
NK+ + R N RG+I
Sbjct: 610 LNKERKRLNKEKERLNKERGSI 631
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +3
Query: 129 FAFQGNLNHKLDSTSVGTLSAEVLDPVNG------RWVYEEPDLKLKVKDVVY 269
+ F G+ H + V TLSA D + G +W+ E DL+L + D+ Y
Sbjct: 1345 YGFGGSNAHTILPAHVLTLSARCKDSLRGAAQSIAKWLTEHEDLRLGLYDICY 1397
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 1841 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 1881
>SB_31296| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 707
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 534 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 574
>SB_31231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 222 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 262
>SB_21807| Best HMM Match : JmjC (HMM E-Value=4.2)
Length = 329
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 189 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 229
>SB_21500| Best HMM Match : GIY-YIG (HMM E-Value=4.4)
Length = 440
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 239 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 279
>SB_51805| Best HMM Match : DUF755 (HMM E-Value=6.8)
Length = 369
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 246 LKVKDVVYYNAVFSINKKIYEKTNQQFTVTELE-DPNASTD--SQKPECKPTKTRVRGGK 416
LKV+ +Y+ A+ S N+K+ + Q V + + D TD S P +P+ RV
Sbjct: 96 LKVQAYIYFTALLSCNRKLNTGSLQDNCVAKAQKDHKKYTDDRSHHPTIQPSGDRVTENT 155
Query: 417 ACAGQT 434
+ A T
Sbjct: 156 SLAKHT 161
>SB_39194| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 603
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 523 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 563
>SB_37265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 197 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 237
>SB_12743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 922
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 813 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 853
>SB_11630| Best HMM Match : GIY-YIG (HMM E-Value=9.1)
Length = 177
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 4 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 44
>SB_7666| Best HMM Match : Cps15 (HMM E-Value=0.93)
Length = 1062
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS +P T+N C Q DT
Sbjct: 889 TKQIIDNHNKRIITASSATEITSSAPTTTNNKTCNCRQKDT 929
>SB_47549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 6 RVLCLILFIKISYAQMPDVKIQAFRPKGLRISVQDVPKMTLFAFQGNLNHKLDSTSV 176
R L + I+I + + PK +++ +P +TL F+ + ++DS S+
Sbjct: 240 RYLSRLSIIEIHCIWQTQLNVLLASPKSFKVARPSIPFITLSTFENAVREEMDSDSI 296
>SB_21241| Best HMM Match : ErmC (HMM E-Value=1.1)
Length = 562
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 287 NQQENIRENKPTVHRNRARRS*CKHRFSETRM*ANKDESARRQSV 421
NQ EN++ +PT+ RNR +R K R +E + + DE RQ +
Sbjct: 250 NQLENLQNQRPTLLRNRDKR--IKRR-AEDNLRLSADEPDPRQVI 291
>SB_51868| Best HMM Match : GIY-YIG (HMM E-Value=5.7)
Length = 256
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E S +P T+N C Q DT
Sbjct: 95 TKQIIDNHNKRIITASSATETASSAPTTTNNKTCNCRQKDT 135
>SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)
Length = 1388
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E S +P T+N C Q DT
Sbjct: 900 TKQIIDNHNKRIITASSTTETASSAPTTTNNKTCNCRQKDT 940
>SB_21374| Best HMM Match : GIY-YIG (HMM E-Value=4)
Length = 177
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E S +P T+N C Q DT
Sbjct: 4 TKQIIDNHNKRIITASSATETASSAPTTTNNKTCNCRQKDT 44
>SB_20299| Best HMM Match : JmjC (HMM E-Value=4.1)
Length = 347
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+++++ E S +P T+N C Q DT
Sbjct: 197 TKQIIDNHNKRIIKASSATEIASSAPTTTNNKTCNCRQKDT 237
>SB_38851| Best HMM Match : RVT_1 (HMM E-Value=9.8e-20)
Length = 838
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E TS P T+N C Q DT
Sbjct: 665 TKQIIDNHNKRIITASSATEITSSPPTTTNNKTCNCRQKDT 705
>SB_29418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 487 SIYRFITPNTPSCPTSVII*QYLPQMETYILTPNFN 594
SI T TP+ T I Q++P M T I TPN +
Sbjct: 354 SIPDMTTIYTPNLHTCAIPIQFIPDMTTTIYTPNLH 389
>SB_23074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 27.9 bits (59), Expect = 8.3
Identities = 32/144 (22%), Positives = 49/144 (34%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDTVRVPRQLEP*TGQHQRRDT 184
T+ V +K + N RC +++ RT +RCP + T V + QH R
Sbjct: 106 TQDVGTAQHKMSEQHNTRCPDSTTQDVRTEQHNTRCPNSTTQDVRTAQHKMSEQHNTRCQ 165
Query: 185 ECRGTGSSQRPMGVRRARS*TKSQXXXXXXXXXXNQQENIRENKPTVHRNRARRS*CKHR 364
R R+ T Q ++Q N R T R +H+
Sbjct: 166 NSTTQDVRTEQHNNTRCRNRTTEQ-------HKMSEQHNTRCRNSTTQDVRT----AQHK 214
Query: 365 FSETRM*ANKDESARRQSVCRTNN 436
SE +D +Q+ R N
Sbjct: 215 MSEQNNRTTQDVGTEQQNNTRCQN 238
>SB_3833| Best HMM Match : Borrelia_orfA (HMM E-Value=1.2)
Length = 594
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 5 TRVVSDFIYKNIVRSNARCENTSFSPERTSNIRSRCPQNDT 127
T+ + D K I+ +++ E S +P T+N C Q DT
Sbjct: 222 TKQIIDNHNKRIITASSATETASSAPTTTNNKTCNCRQKDT 262
>SB_1343| Best HMM Match : IBB (HMM E-Value=2.3)
Length = 556
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +3
Query: 423 AGQTIFEEQFDSLDENV-----WQIEQYIPIYHPEYPFVSYQRNNLTVSTADGNLHINAK 587
A + EE+ D ++E + + YIP+Y PE Q+ + T + D + +
Sbjct: 241 ASREPIEEESDEMNETISMEVPGSLPDYIPVYSPETIVWGLQKPSKTSKSKDHQECLGKR 300
Query: 588 LQQHMPGFLDDSIYSGTLNLFQWVYFRQQRHA 683
L G +++ I G + V F ++ A
Sbjct: 301 LALWKNGNIEELIREGRTIQRRLVQFHRKEDA 332
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,326,066
Number of Sequences: 59808
Number of extensions: 483760
Number of successful extensions: 1628
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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