Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31041
(447 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 89 2e-18
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 89 2e-18
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 89 2e-18
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 89 2e-18
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 89 2e-18
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 89 2e-18
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 89 2e-18
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 89 2e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 71 5e-13
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 53 1e-07
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 43 9e-05
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 37 0.008
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 292 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 322 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
+KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 70.5 bits (165), Expect = 5e-13
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 123
+KY WIGGSIL SL TFQQMW+SK EYDESG IV +KC
Sbjct: 396 RKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 52.8 bits (121), Expect = 1e-07
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +1
Query: 19 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 126
WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 339 WIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 43.2 bits (97), Expect = 9e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +1
Query: 4 KKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 108
++Y+VW GGS+LAS S F Q+ +K EY E GP I
Sbjct: 380 QRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +1
Query: 4 KKYSVWIGGSILASL--STFQQMWISKEEYDESG 99
+K+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 350 RKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,372,353
Number of Sequences: 27780
Number of extensions: 158723
Number of successful extensions: 348
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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