Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31039
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical pr... 200 7e-52
AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical ... 140 1e-33
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 133 1e-31
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 124 9e-29
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 31 0.67
U41270-5|AAA82442.2| 364|Caenorhabditis elegans Hypothetical pr... 30 2.1
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 29 3.6
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 29 3.6
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 4.7
>Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical
protein C37E2.1 protein.
Length = 379
Score = 200 bits (489), Expect = 7e-52
Identities = 105/205 (51%), Positives = 136/205 (66%), Gaps = 5/205 (2%)
Frame = +2
Query: 83 LSRNIFRAVMQGSQHVGKGVHTSSVTTEKNQPRATKE--GRIKCTLIPGDGVGPELVYAV 256
LSR + Q +G SS PR E ++K T+IPGDGVGPEL+Y V
Sbjct: 2 LSRTVSSLSRVAPQTLGAVNAASSRQYSITAPRPPTELNQKLKVTIIPGDGVGPELIYTV 61
Query: 257 QEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNK-ICIKGILATPDFSHT-GEL 430
Q++ K IP++FE F SEV+ T S+ +E+ V SI N + +KG + HT GEL
Sbjct: 62 QDIVKQTGIPIEFEEIFLSEVHYTRSSSIENAVESIGRNNNVALKGAIEESAVLHTEGEL 121
Query: 431 QTLNMKLRNALDLYANVVHVKSLPNVKCRH-QDVDCIIIREQTEGEYSALEHESVPGVVE 607
Q LNM+LR +LDL+ANVVH+K+L +K RH + +D +I+REQTEGEYS+LEHE VPGV+E
Sbjct: 122 QGLNMRLRRSLDLFANVVHIKTLDGIKTRHGKQLDFVIVREQTEGEYSSLEHELVPGVIE 181
Query: 608 CLKIITAAKSERIAKFAFDYAVEDG 682
CLKI T K+ERIAKFAFDYA + G
Sbjct: 182 CLKISTRTKAERIAKFAFDYATKTG 206
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 675 KMGRKKVTAVHKANIMEAG 731
K GRKKVTAVHKANIM+ G
Sbjct: 204 KTGRKKVTAVHKANIMKLG 222
>AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical
protein C30F12.7 protein.
Length = 373
Score = 140 bits (339), Expect = 1e-33
Identities = 69/169 (40%), Positives = 103/169 (60%)
Frame = +2
Query: 176 PRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVV 355
P A GR +PGDG+GPE++ ++ +F PV+FE S + L ++ +
Sbjct: 28 PLAKYGGRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVS--SSLLDGDMDAAM 85
Query: 356 NSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRHQDVDC 535
+I N + IKG + T + + N++LR LDLYAN++H ++P V RH +D
Sbjct: 86 LAIERNGVAIKGNIETKH--DDPQFNSRNVELRTKLDLYANILHCVTIPTVPTRHSGIDI 143
Query: 536 IIIREQTEGEYSALEHESVPGVVECLKIITAAKSERIAKFAFDYAVEDG 682
++IRE TEGEYS LEHE+VPG+VE +KI+T K ERI++ AF+YA +G
Sbjct: 144 VLIRENTEGEYSGLEHEAVPGIVESIKIVTREKIERISRMAFEYAKANG 192
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 681 GRKKVTAVHKANIMEAG 731
GRKKVTAVHKANI + G
Sbjct: 192 GRKKVTAVHKANIQKLG 208
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 133 bits (322), Expect = 1e-31
Identities = 70/167 (41%), Positives = 102/167 (61%), Gaps = 4/167 (2%)
Frame = +2
Query: 194 GRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVN 373
GR T++PGDG+GPE+++ V+ + A PVDFE + S L + + +I N
Sbjct: 50 GRHNVTVLPGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDA-SEDLAEAITAIKRN 108
Query: 374 KICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRHQDVDCIIIREQ 553
+ +KG + T F + + N++LR L+LYANV+H ++P V RH +D +IIRE
Sbjct: 109 GVALKGNIETK-FDNPSFVSR-NLELRRQLNLYANVLHCSTIPTVPSRHTGIDMVIIREN 166
Query: 554 TEGEYSALEHESV----PGVVECLKIITAAKSERIAKFAFDYAVEDG 682
TEGEYS EHE+V P VVE LK++T KSE+I +FAF +A + G
Sbjct: 167 TEGEYSGNEHEAVNAPHPRVVESLKVVTREKSEQITRFAFQFAKKYG 213
Score = 34.3 bits (75), Expect = 0.095
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 675 KMGRKKVTAVHKANIMEAG 731
K GRKKVTAVHKANI + G
Sbjct: 211 KYGRKKVTAVHKANIQKLG 229
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 124 bits (298), Expect = 9e-29
Identities = 72/188 (38%), Positives = 112/188 (59%), Gaps = 3/188 (1%)
Frame = +2
Query: 128 VGKGVHTSSVTTEKNQPRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFF 307
+GK + +S T ++ ++ + R + TLIPGDG+GPE+ +VQ++F+AA P+ ++
Sbjct: 2 LGKCIKKASSTVGQSIRYSSGDVR-RVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVD 60
Query: 308 FSEV---NPTLSAPLEDVVNSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYAN 478
+ V + P + + NK+ +KG L TP G ++LN+ +R LYAN
Sbjct: 61 VTPVKGRDGVFRIPSR-CIELMHANKVGLKGPLETP--IGKGH-RSLNLAVRKEFSLYAN 116
Query: 479 VVHVKSLPNVKCRHQDVDCIIIREQTEGEYSALEHESVPGVVECLKIITAAKSERIAKFA 658
V +SL K + +VD + IRE TEGEYS +EHE VPGVV+ +K+IT S +A FA
Sbjct: 117 VRPCRSLEGHKTLYDNVDVVTIRENTEGEYSGIEHEIVPGVVQSIKLITETASRNVASFA 176
Query: 659 FDYAVEDG 682
F+YA ++G
Sbjct: 177 FEYARQNG 184
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 681 GRKKVTAVHKANIM 722
GRK VTAVHKANIM
Sbjct: 184 GRKVVTAVHKANIM 197
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/58 (24%), Positives = 35/58 (60%)
Frame = +2
Query: 467 LYANVVHVKSLPNVKCRHQDVDCIIIREQTEGEYSALEHESVPGVVECLKIITAAKSE 640
+ ++++ + S+P+++ R + +DC++ QT+G + L S P V++ + I + +E
Sbjct: 836 IISSLLALCSIPHIQVRRRQLDCVMSLMQTDGAF--LLSTSWPNVIQIISAIIDSDTE 891
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/58 (24%), Positives = 35/58 (60%)
Frame = +2
Query: 467 LYANVVHVKSLPNVKCRHQDVDCIIIREQTEGEYSALEHESVPGVVECLKIITAAKSE 640
+ ++++ + S+P+++ R + +DC++ QT+G + L S P V++ + I + +E
Sbjct: 836 IISSLLALCSIPHIQVRRRQLDCVMSLMQTDGAF--LLSTSWPNVIQIISAIIDSDTE 891
>U41270-5|AAA82442.2| 364|Caenorhabditis elegans Hypothetical
protein AH9.4 protein.
Length = 364
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 374 KICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 520
+ I G T FSHTGE TL+ K AL + ++ + P+VK H
Sbjct: 217 RYAISGPATTKRFSHTGETDTLDNKAHVALAI--SITASTNTPSVKRIH 263
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 422 GELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 520
G LQT++ +N LDLY+ + K K RH
Sbjct: 169 GSLQTIHFLTKNLLDLYSQLFSRKITAEFKTRH 201
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 422 GELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 520
G LQT++ +N LDLY+ + K K RH
Sbjct: 169 GSLQTIHFLTKNLLDLYSQLFSRKITAEFKTRH 201
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 296 ESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYA 475
ES S N L PL D+ N + + +GI+ F H G+++ +++ ++
Sbjct: 795 ESVILSMANDNLE-PLGDLKNLNQKSTVKCEGIICATTFVHRGQIRFSGLEVNILTPIF- 852
Query: 476 NVVHVKSLPNVKCRHQDVDCIII 544
VH L NV+ + V + I
Sbjct: 853 --VHEGRLTNVENKQNHVKHLFI 873
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 296 ESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYA 475
ES S N L PL D+ N + + +GI+ F H G+++ +++ ++
Sbjct: 795 ESVILSMANDNLE-PLGDLKNLNQKSTVKCEGIICATTFVHRGQIRFSGLEVNILTPIF- 852
Query: 476 NVVHVKSLPNVKCRHQDVDCIII 544
VH L NV+ + V + I
Sbjct: 853 --VHEGRLTNVENKQNHVKHLFI 873
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,737,054
Number of Sequences: 27780
Number of extensions: 391887
Number of successful extensions: 1160
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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