Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31039
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 23 2.4
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 23 2.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 5.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 7.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 7.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 7.2
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 7.2
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 7.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 7.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 7.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 9.5
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 328 CWIHFRKEKGFKVHWNAGRLENFL 257
C++ KE+GF +W G L N +
Sbjct: 59 CFVRIPKEQGFLSYWR-GNLANVI 81
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 328 CWIHFRKEKGFKVHWNAGRLENFL 257
C++ KE+GF +W G L N +
Sbjct: 59 CFVRIPKEQGFLSYWR-GNLANVI 81
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 3.1
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +1
Query: 199 YQMHLDSWGW 228
+Q HLD W W
Sbjct: 620 HQQHLDQWNW 629
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 661 ESEFRDTLGFRCGDDLQTLHHAGNG 587
ESEF D ++C D + G G
Sbjct: 57 ESEFNDENYWQCNDKKTDIEETGRG 81
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 100 SSCYAGISTCWKGCTHKFGNNGEKSTEGNKGRSYQ 204
SSC++ + + N+GE+S ++ R Y+
Sbjct: 228 SSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYK 262
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 100 SSCYAGISTCWKGCTHKFGNNGEKSTEGNKGRSYQ 204
SSC++ + + N+GE+S ++ R Y+
Sbjct: 228 SSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYK 262
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 100 SSCYAGISTCWKGCTHKFGNNGEKSTEGNKGRSYQ 204
SSC++ + + N+GE+S ++ R Y+
Sbjct: 228 SSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYK 262
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 100 SSCYAGISTCWKGCTHKFGNNGEKSTEGNKGRSYQ 204
SSC++ + + N+GE+S ++ R Y+
Sbjct: 228 SSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYK 262
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 100 SSCYAGISTCWKGCTHKFGNNGEKSTEGNKGRSYQ 204
SSC++ + + N+GE+S ++ R Y+
Sbjct: 228 SSCHSRYEDLRHEDRNSYRNDGERSCSRDRSREYK 262
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 100 SSCYAGISTCWKGCTHKFGNNGEKSTEGNKGRSYQ 204
SSC++ + + N+GE+S ++ R Y+
Sbjct: 228 SSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYK 262
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 100 SSCYAGISTCWKGCTHKFGNNGEKSTEGNKGRSYQ 204
SSC++ + + N+GE+S ++ R Y+
Sbjct: 228 SSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYK 262
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3
Query: 543 SESRPRESTQLWNMNPFPAW 602
++ PR LW++ P AW
Sbjct: 90 AKHNPRGKDALWSLVPHMAW 109
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,996
Number of Sequences: 438
Number of extensions: 5329
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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