Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31037
(808 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 40 0.003
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 35 0.088
03_06_0155 - 32031370-32031707,32033066-32033279 34 0.15
11_06_0553 - 24920428-24921057,24921149-24921276,24921372-249214... 33 0.20
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 32 0.62
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 31 1.1
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 30 1.9
05_04_0158 + 18613265-18615304 30 2.5
02_05_0828 + 32057670-32057851,32060054-32060132,32060808-320608... 29 3.3
11_06_0722 - 26678873-26680843 29 4.4
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 29 4.4
02_03_0357 + 18075171-18077240 29 4.4
07_01_0463 + 3502708-3503535 29 5.8
06_02_0011 - 10569471-10572245 29 5.8
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 28 7.6
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +1
Query: 451 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 630
E+ ++ ++ + AMLQ +KD N +Q+K ++ ++E +TK Q +E
Sbjct: 1431 EEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYH 1490
Query: 631 ISLSIRIKPLTIEGLSVD---KLRQKAQ-ELLGVHRQTRDRENDLEERQKRQD 777
++ + L +E L K R+KA+ E+L ++ D E+ KR++
Sbjct: 1491 ELKDVKEQKLCLERLDSSKETKRRRKAESEMLSALKKVHDLEHQYLNELKRRE 1543
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 34.7 bits (76), Expect = 0.088
Identities = 28/120 (23%), Positives = 57/120 (47%)
Frame = +1
Query: 442 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 621
+I+ ++L E ++ + + A+ + K N T Q +S + + E N K+ E
Sbjct: 367 EIQMANEKLNELKQTKVNLENAVSELKKEVENLTEQNRSSELLIQELRDEINSLKDSKNE 426
Query: 622 EKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDRENDLEERQKRQDYDLKELKK 801
+ S+R TI L+ +K L H+Q+ +R +DLE + + +L+E+++
Sbjct: 427 LQNEIQSLRS---TISQLNTEK-----DATLFQHQQSVERVSDLESQLLKLQPELEEIEQ 478
>03_06_0155 - 32031370-32031707,32033066-32033279
Length = 183
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 445 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 624
IEE +QR EEA + +Q + +A K + + + G+ + R K+ E L E+
Sbjct: 98 IEELKQREEEATQAQQQADVKLLEAKKLASQYQKEADKCSSGMDTCEEAREKSSEALVEQ 157
Query: 625 KKIS 636
+K++
Sbjct: 158 RKLT 161
>11_06_0553 -
24920428-24921057,24921149-24921276,24921372-24921409,
24921522-24921734,24921906-24921998,24922089-24922276,
24922396-24922502,24922614-24922775,24922870-24922953,
24923060-24923168,24923340-24923468,24923504-24923556,
24923654-24923759,24924082-24924189
Length = 715
Score = 33.5 bits (73), Expect = 0.20
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +1
Query: 481 KKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR-IKP 657
K Q + ++ D SK I ++ G + L K +E K++S I+ +K
Sbjct: 454 KLTQILSDSLGDGSKVLMVVHISPSDDDIGETVCSLSFAKRARSIESSKELSEDIKKLKQ 513
Query: 658 LTIEGLSVDKLRQKAQELLGVHRQTRDRENDLEERQKRQDYDLKELKKDK 807
I L + + QEL ++ Q + E LEER+K + L +K
Sbjct: 514 KRIAELDKE-ICDAEQELKDLNEQIKRAETSLEERKKLSSSACQALSDEK 562
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 442 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 621
+I E+R+R + ++ A+L+AMK+ N ++ E N +LE K+QL+E
Sbjct: 41 EIAEERERFQLEQRGNDALLEAMKE-ELVAANNELEAAKEEISRKNNELE--SVKKQLQE 97
Query: 622 EK 627
+
Sbjct: 98 SE 99
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 31.1 bits (67), Expect = 1.1
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 442 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 621
+ E K ++LEE EKK + + K G +QK E+ + + +R QLE
Sbjct: 295 EAESKNRKLEEREKKIAEREEKVSAREKVG----LQKLLEDHNV-KLESKRRDFDLQLEN 349
Query: 622 EKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQT-RDRENDLEERQKRQDYDLKELK 798
EKK S + + + +K + ++E L Q + + LEE Q D LK
Sbjct: 350 EKK-SFDAMLVQKEADLVQREKDVRSSEEKLSKKEQVLNESKKKLEEWQNDLDTKSNALK 408
Query: 799 K 801
K
Sbjct: 409 K 409
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/120 (21%), Positives = 56/120 (46%)
Frame = +1
Query: 442 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 621
+I+ ++L E ++ + + A+ + K + T Q +S + + E N + E
Sbjct: 587 EIQMANEKLNELKQTKVNLENAVSELKKEVESLTEQNRSSELLIQELRDEINSLTDSRNE 646
Query: 622 EKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDRENDLEERQKRQDYDLKELKK 801
+ S+R TI L+ +K L H+Q+ +R +DLE + + +L+E+++
Sbjct: 647 LQNEIQSLRS---TISQLNTEK-----DAALFQHQQSVERVSDLESQLLKLQPELEEIEQ 698
>05_04_0158 + 18613265-18615304
Length = 679
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAML-----QAMKDASKTGPNFTIQKK----SENFGLSNAQLERNK 600
+EK ++ +E E K Q L +AMK KTG N I+KK +E +A++ ++K
Sbjct: 608 QEKVEKNQEKEMKIQEKLGEIFDKAMKSEEKTGQNPGIEKKIQDTAEKKQEHDARVVQDK 667
Query: 601 TKEQLEEEKKI 633
++ +E KKI
Sbjct: 668 VEKIQDEAKKI 678
>02_05_0828 +
32057670-32057851,32060054-32060132,32060808-32060869,
32060993-32061092,32061169-32061210,32062057-32062098,
32062189-32062343,32063609-32063636
Length = 229
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 586 LERNKTKEQLEEEKKISLSIR-IKPLTIEGLSVDKLRQKAQEL-LGVHRQTRDRENDLEE 759
LE +K E+ + SL +R ++ +EGLS+D+L+Q + L G+HR ++ E
Sbjct: 88 LEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFME 147
Query: 760 R 762
+
Sbjct: 148 Q 148
>11_06_0722 - 26678873-26680843
Length = 656
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 595 NKTKEQLEEEKKISLSIRIKPLTIEGLSVDK-LRQKAQELLGVH 723
NKTK+ +E+K++ LS+ +K IE L ++ L Q ++ +H
Sbjct: 418 NKTKKGRKEDKRVRLSMDVKKTVIETLKKNRGLGQLGNCVISLH 461
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/125 (21%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Frame = +1
Query: 445 IEEKRQRLEEAEKKRQAMLQAMKDA-SKTGPNFT-IQKKSENFGLSNAQL-ERNKTKEQL 615
+EE +R+EE E +++ +++ + +A +K ++T +Q+ + + +L + ++ ++L
Sbjct: 110 LEELTRRIEELELEKEKLVKGVTEAENKQNLHYTSLQEAQRSLADKDKELADATQSLKEL 169
Query: 616 EEEKKISLSIRIKPLTIE-GLSVDKLR--QKAQELLGVH-RQTRDRENDLEERQKRQDYD 783
E + S RI+ + E S DKL ++ ++ +H Q R ++L++ + +
Sbjct: 170 GSELESSKE-RIQEIEAELAASADKLHKLEELKDERSLHAAQEAKRASELDKTLETAQLN 228
Query: 784 LKELK 798
+KE++
Sbjct: 229 MKEME 233
Score = 28.7 bits (61), Expect = 5.8
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = +1
Query: 445 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE- 621
+ E +L AEKK + Q +KDA++ + ++ + L + +R + L E
Sbjct: 820 LTEFESKLASAEKKSMDLEQELKDATEECNSSRLRVDELSGELEEYKEKRTSLEASLLEA 879
Query: 622 -EKKISLSIRIKPLTIEGLSVDKLRQKAQ-ELLGVHRQTRDRENDLEE-RQKRQDYD 783
+K+ LS ++ + E ++L +KA + L Q + + +LE R K ++ +
Sbjct: 880 KQKEAELSEKLDQVNEEKEKFEELSKKATIKHLEAENQVQALQGELESARHKLEEVE 936
>02_03_0357 + 18075171-18077240
Length = 689
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +1
Query: 541 TIQKKSENFGLSNAQLERNKT-----KEQLEEEKKISLSIRIKP 657
+I++K +NF L+ ++ RN+T QL EE KIS+S + P
Sbjct: 594 SIKEKFKNFNLAFEEIYRNQTTWKVPDPQLREELKISISENVIP 637
>07_01_0463 + 3502708-3503535
Length = 275
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Frame = +1
Query: 592 RNKTKEQLEEEKKISLSIRIKPLTIEGLSVD---------KLRQKAQELLGVHRQTRDRE 744
++K+ +E+K+I + ++ K + E + +D K + ++ +D E
Sbjct: 35 KDKSSGDEDEKKEIEIEVKAKIVDKEEVKLDSDDGAKSAVKSKDSKKDKENKKSDKKDDE 94
Query: 745 NDLEERQ-KRQDYDLKELKKDK 807
+D E+ + K+++ ++KE KKDK
Sbjct: 95 HDDEDEEGKKKEKEMKEKKKDK 116
>06_02_0011 - 10569471-10572245
Length = 924
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 631 ISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDRENDLEERQKRQ 774
+ L + + L + DKL++ Q+L GVH + DR D + R+
Sbjct: 142 VFLYVGVHVLVFMRVIPDKLKEMIQKLWGVHDRQSDRHQDKDVEDARK 189
>03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 28.3 bits (60), Expect = 7.6
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Frame = +1
Query: 463 RLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 642
+L+E E+ + Q + + S+ Q +SE L +L+ + + E K L
Sbjct: 784 KLKEKEEMCTTLQQKIAEESEHKLRLQQQSESEIKELE-LKLKEQEHHRSVAESKIKELE 842
Query: 643 IRIKPLTIE-GLSVDKLRQKAQELLGVHR-------QTRDRENDLEERQKRQDYDL 786
+++K ++ K + QELL R + RD EN+L+ER QD ++
Sbjct: 843 LKLKEQEHHRSVAESKAMEIGQELLETQRTEAMLQIKPRDLENNLQERTTLQDTNM 898
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,078,093
Number of Sequences: 37544
Number of extensions: 270672
Number of successful extensions: 862
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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