Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31033
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    27   0.65 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   6.1  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.0  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 293 ERKTHSKYECTDCNITSNSEPLTSQYHLSTN 385
           ++ T S Y C  CN TSN   L S+ HL T+
Sbjct: 120 QQSTGSTYMCNYCNYTSNKLFLLSR-HLKTH 149


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 180  DARTFYFSKIPKSQHK 133
            D +  YF K+PK QH+
Sbjct: 1172 DYKAAYFGKLPKHQHQ 1187


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 412 IFIYHGNYLSICLNPQTQPTEFFAGSSQR 498
           IFI H   L +   P  QP   F+ +SQR
Sbjct: 343 IFINHLPKLLVMRRPIYQPLHHFSAASQR 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,929
Number of Sequences: 2352
Number of extensions: 12730
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)