Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31033
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY131211-1|AAM97280.1|  608|Drosophila melanogaster scaffold pro...    30   4.1  
AY069854-1|AAL39999.1|  607|Drosophila melanogaster SD10307p pro...    30   4.1  
AE014297-3264|AAF56090.3|  608|Drosophila melanogaster CG33193-P...    30   4.1  

>AY131211-1|AAM97280.1|  608|Drosophila melanogaster scaffold
           protein salvador protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 10  NKKKAQHKR*TYTRNAKLNEPPDYSINKIFQD 105
           NK+K+QHK     +  K + PPD S+  ++ D
Sbjct: 20  NKEKSQHKEGVVGKYMKKDTPPDISVINVWSD 51


>AY069854-1|AAL39999.1|  607|Drosophila melanogaster SD10307p
           protein.
          Length = 607

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 10  NKKKAQHKR*TYTRNAKLNEPPDYSINKIFQD 105
           NK+K+QHK     +  K + PPD S+  ++ D
Sbjct: 20  NKEKSQHKEGVVGKYMKKDTPPDISVINVWSD 51


>AE014297-3264|AAF56090.3|  608|Drosophila melanogaster CG33193-PA
           protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 10  NKKKAQHKR*TYTRNAKLNEPPDYSINKIFQD 105
           NK+K+QHK     +  K + PPD S+  ++ D
Sbjct: 20  NKEKSQHKEGVVGKYMKKDTPPDISVINVWSD 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,386,511
Number of Sequences: 53049
Number of extensions: 567079
Number of successful extensions: 965
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)