Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31031
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.14 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   0.44 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   0.77 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   0.77 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   7.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   9.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.14
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -1

Query: 147 PTQYRFGSILI*SLSHIMFVCILSLL*NTSNFVNRYRKYAMYLITELCL 1
           P  Y F S  I    H++F C+L +L     F   +  + ++L+  +C+
Sbjct: 210 PCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCI 258



 Score = 22.6 bits (46), Expect = 1.3
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -2

Query: 284 ILSCQYHMAYLCNFFFIPLLFSKHGTYDFFPY*LIKLSININ*SSFPRNTVSVVY*YNLC 105
           IL C Y+  Y    F + LLF     Y   P     L I     +F   TV +++   + 
Sbjct: 109 ILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPL-FFLLCIYYFYCAFIIFTVHLLFLLCIY 167

Query: 104 HILCLFV 84
           H  C F+
Sbjct: 168 HFFCAFI 174



 Score = 22.2 bits (45), Expect = 1.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 352 SSLHGNKKDXLIFAIVLSNRQVIYYRVNIIWPICVIFFLYHCYF 221
           +SL     D L+F      R   +Y V+I + + ++F L   YF
Sbjct: 36  ASLQVGILDSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYF 79


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 107 CHILCLFVFSHFCKIRQTLLIGTENTQ 27
           CH +   +FS  C+I++  ++   NTQ
Sbjct: 67  CHRMKPALFSVLCEIKEKTVLSLRNTQ 93


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 32  YFLYLLTKFDVFYKSERIQTNIICDK 109
           YF+ LL       +S R   N+ICDK
Sbjct: 327 YFIQLLAIVPEKEESSRQAVNLICDK 352


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 32  YFLYLLTKFDVFYKSERIQTNIICDK 109
           YF+ LL       +S R   N+ICDK
Sbjct: 327 YFIQLLAIVPEKEESSRQAVNLICDK 352


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 32  YFLYLLTKFDVFY 70
           YF+YL T + ++Y
Sbjct: 149 YFIYLFTVYYIYY 161


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 5    HNSVIKYIAYFLYLLT 52
            HN + +++ YF+ L+T
Sbjct: 1236 HNVIGQFLGYFIGLIT 1251


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -3

Query: 244 FFLYHCYF 221
           F+L+HC+F
Sbjct: 666 FWLFHCHF 673


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 57  NFVNRYRKYAMYLITELCL 1
           N+++ + +  +YLIT++ L
Sbjct: 157 NYIHFFYQLLLYLITDMIL 175


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 155 SSFPRNTVSVVY 120
           S+ P N VSVVY
Sbjct: 259 SATPENNVSVVY 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,978
Number of Sequences: 336
Number of extensions: 1878
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)