Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31031
         (378 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    30   0.032
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   1.2  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   3.7  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   3.7  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   4.9  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    22   6.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    22   6.5  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    22   6.5  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    22   8.6  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 364 PLCLSSLHGNKKDXLIFAIVLSNRQVIYYRVNIIWPICVIFFL 236
           P  L+   GN  +  I   ++  R+ ++Y VN+I P  +I FL
Sbjct: 207 PAYLNVYEGNPTETDITFYIIIRRKTLFYTVNLILPTVLISFL 249


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 322 LIFAIVLSNRQVIYYRVNIIWPICVIFFL 236
           +IF I L  R+ ++Y VN+I P   I FL
Sbjct: 229 IIFNITL-RRKTLFYTVNLIIPCVGISFL 256


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 307 VLSNRQVIYYRVNIIWPICVIFFL 236
           +   R+ ++Y VNII P   I FL
Sbjct: 237 ITMRRKTLFYTVNIIIPCMGISFL 260


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 307 VLSNRQVIYYRVNIIWPICVIFFL 236
           +   R+ ++Y VNII P   I FL
Sbjct: 237 ITMRRKTLFYTVNIIIPCMGISFL 260


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 319 IFAIVLSNRQVIYYRVNIIWPICVIFFL 236
           IF  +   R+ ++Y VN+I P   I +L
Sbjct: 242 IFFNITLRRKTLFYTVNLIIPCVGISYL 269


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 322 LIFAIVLSNRQVIYYRVNIIWPICVI 245
           + FAI++  R+ +YY  N+I P CV+
Sbjct: 204 ITFAILI-RRKTLYYFFNLIVP-CVL 227


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 307 VLSNRQVIYYRVNIIWPICVIFFL 236
           +   R+ ++Y VN+I P   I FL
Sbjct: 233 ITMRRKTLFYTVNLIIPCMGISFL 256


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 342 CREDKHRGP 368
           C EDKH GP
Sbjct: 239 CAEDKHEGP 247


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 295 RQVIYYRVNIIWPICVIFFL 236
           R+ ++Y VN+I P   I FL
Sbjct: 243 RKTLFYTVNLIIPCVGITFL 262


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,388
Number of Sequences: 2352
Number of extensions: 6452
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)