Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31031
         (378 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29117-6|CAA82378.1|  176|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U80836-15|AAB37898.1|  264|Caenorhabditis elegans Hypothetical p...    27   4.5  
U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical pr...    27   5.9  
AL021480-1|CAA16326.1|  133|Caenorhabditis elegans Hypothetical ...    27   5.9  
Z81470-7|CAB03885.1|  129|Caenorhabditis elegans Hypothetical pr...    26   7.8  
AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical ...    26   7.8  
AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical ...    26   7.8  

>Z29117-6|CAA82378.1|  176|Caenorhabditis elegans Hypothetical
           protein C48B4.6 protein.
          Length = 176

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 275 CQYHMAYLCNFFFIPLLFSKHGTYDFFPY 189
           C YHM Y   +FF+ +L + H  + F  +
Sbjct: 40  CYYHMFYSRQYFFLEILVTIHTGFSFIVF 68


>U80836-15|AAB37898.1|  264|Caenorhabditis elegans Hypothetical
           protein B0432.1 protein.
          Length = 264

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 124 YINIIFVTYYVCLYSLTFVKYV 59
           YI I  V + +CL+ +TF KYV
Sbjct: 66  YIGIADVLHCICLFWMTFQKYV 87


>U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical
           protein C32D5.6 protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 8   NSVIKYIAYFLYLLTKFDVFYKSERIQTNIICDKDYINILPKRYC 142
           NS++     F+Y    FD+F K+ ++   I+ D D +  + K  C
Sbjct: 431 NSLLFAHYEFIYFWNGFDIFGKNSKMVRGIVEDMDRVWEMKKSTC 475


>AL021480-1|CAA16326.1|  133|Caenorhabditis elegans Hypothetical
           protein Y39E4A.1 protein.
          Length = 133

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 304 LSNRQVIYYRVNIIWPICVIFFL 236
           L N +++Y+ +  IW IC++ F+
Sbjct: 102 LKNAKIVYWTMLGIWTICLVLFV 124


>Z81470-7|CAB03885.1|  129|Caenorhabditis elegans Hypothetical
           protein C14A6.8 protein.
          Length = 129

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = -3

Query: 355 LSSLHGNKKDXLIFAIVLSNRQVIYYRVNIIWPICVIFFLYHCYFQNMGRTIF 197
           L    GNK         + N ++ ++ +  IW IC+ FF+   Y    G  IF
Sbjct: 76  LKKPRGNKAKIKKLKNKIKNVKIFFWTMIGIWVICLCFFVL-IYLNTYGIRIF 127


>AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.2b protein.
          Length = 1111

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 14  VIKYIAYFLYLLTKFDVFYKSERIQTNIICDKDYINIL 127
           V+  +A+F ++ T F +FY+   I   II   D + I+
Sbjct: 399 VLAIVAFFGFMYTSFILFYRGSSIGKIIIRALDLVTIV 436


>AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.2a protein.
          Length = 1127

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 14  VIKYIAYFLYLLTKFDVFYKSERIQTNIICDKDYINIL 127
           V+  +A+F ++ T F +FY+   I   II   D + I+
Sbjct: 415 VLAIVAFFGFMYTSFILFYRGSSIGKIIIRALDLVTIV 452


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,268,733
Number of Sequences: 27780
Number of extensions: 153303
Number of successful extensions: 299
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)