Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31031
(378 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 25 0.30
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 0.52
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 1.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 2.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 2.1
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 2.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 3.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 3.6
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 4.8
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 6.4
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 8.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 8.4
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 20 8.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.0 bits (52), Expect = 0.30
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 307 VLSNRQVIYYRVNIIWPICVIFFL 236
++ R+ ++Y VN+I P +I FL
Sbjct: 227 IIIRRKTLFYTVNLILPTVLISFL 250
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.2 bits (50), Expect = 0.52
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 322 LIFAIVLSNRQVIYYRVNIIWPICVIFFL 236
++F I L R+ ++Y VN+I P I FL
Sbjct: 226 IVFNITL-RRKTLFYTVNLIIPCVGISFL 253
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 1.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 307 VLSNRQVIYYRVNIIWPICVIFFL 236
+ R+ ++Y VNII P I FL
Sbjct: 238 ITMRRKTLFYTVNIIIPCMGISFL 261
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 1.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 307 VLSNRQVIYYRVNIIWPICVIFFL 236
+ R+ ++Y VNII P I FL
Sbjct: 238 ITMRRKTLFYTVNIIIPCMGISFL 261
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.0 bits (47), Expect = 1.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 319 IFAIVLSNRQVIYYRVNIIWPICVIFFL 236
IF + R+ ++Y VN+I P I +L
Sbjct: 225 IFFNITLRRKTLFYTVNLIVPCVSISYL 252
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 2.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 307 VLSNRQVIYYRVNIIWPICVIFFL 236
+ R+ ++Y VN+I P I FL
Sbjct: 234 ITMRRKTLFYTVNLIIPCMGISFL 257
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 2.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 310 IVLSNRQVIYYRVNIIWPICVI 245
+V+ R+ +YY N+I P CV+
Sbjct: 224 VVIIRRRTLYYFFNLIVP-CVL 244
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.2 bits (45), Expect = 2.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 307 VLSNRQVIYYRVNIIWPICVIFFL 236
+ R+ ++Y VN+I P I FL
Sbjct: 243 ITMRRKTLFYTVNLIIPCVGITFL 266
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 3.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 336 IKKTXSYSQLF*VIGK*YIIVSI 268
+KKT S +F VIG Y VS+
Sbjct: 61 VKKTASAGPIFGVIGGSYSSVSL 83
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 3.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 336 IKKTXSYSQLF*VIGK*YIIVSI 268
+KKT S +F VIG Y VS+
Sbjct: 151 VKKTASAGPIFGVIGGSYSSVSL 173
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.0 bits (42), Expect = 4.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -2
Query: 98 LCLFVFSHFCKIRQTLLIGTENT 30
LC+ FC I + L G + T
Sbjct: 132 LCMISVDRFCAITKPLKYGVKRT 154
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 20.6 bits (41), Expect = 6.4
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +3
Query: 258 GHMILTR*YITCLLLRTIANMXQSFLLPCRE 350
GH++ Y +++ I N L+ CR+
Sbjct: 36 GHIVSIVFYSVLMIISAIGNTTVLILITCRK 66
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 8.4
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -3
Query: 307 VLSNRQVIYYRVNIIWPICVI 245
+L R+ YY + I P C++
Sbjct: 235 LLFKREFSYYLIQIYIPCCML 255
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 8.4
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -3
Query: 307 VLSNRQVIYYRVNIIWPICVI 245
+L R+ YY + I P C++
Sbjct: 235 LLFKREFSYYLIQIYIPCCML 255
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.2 bits (40), Expect = 8.4
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -2
Query: 377 MISWAPMFVLPTW 339
+I W P FV+ W
Sbjct: 345 IICWLPFFVVNLW 357
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,140
Number of Sequences: 438
Number of extensions: 2363
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9176370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -