Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31030
         (743 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.99 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.99 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.3  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   7.0  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   7.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.2  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 219 QRLPYPSDRNALL-LHGRNRQGRGTYPCGLTR 127
           ++LP    ++ LL L+G NR+ RG Y C + R
Sbjct: 372 RQLPGTGRQSELLRLNGINREDRGMYQCIVRR 403


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 219 QRLPYPSDRNALL-LHGRNRQGRGTYPCGLTR 127
           ++LP    ++ LL L+G NR+ RG Y C + R
Sbjct: 372 RQLPGTGRQSELLRLNGINREDRGMYQCIVRR 403


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 700 REIDFETSYQLTTTNIKGLSGQVEKG--SNLQL 608
           ++ID+E    L   +++GL+G    G   NLQL
Sbjct: 300 KDIDYENVQSLYQPHLRGLNGLEFAGRPQNLQL 332


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +2

Query: 635 LSRKSLYVRSRELIRCF 685
           +S  ++Y+R  +L++CF
Sbjct: 107 ISDANIYIRFNKLVKCF 123


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +2

Query: 635 LSRKSLYVRSRELIRCF 685
           +S  ++Y+R  +L++CF
Sbjct: 107 ISDANIYIRFNKLVKCF 123


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 590 TCPLFMKIHFTNI*NSIERFYSQ*FGYYTFETD 492
           TC     IH  N+ NS++  Y   +  Y F +D
Sbjct: 13  TCQGVTDIHSRNLTNSLKVIYEWKYIDYDFGSD 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,674
Number of Sequences: 438
Number of extensions: 3810
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)