Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31023
(343 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide... 28 1.4
At3g13180.1 68416.m01649 NOL1/NOP2/sun family protein / antiterm... 27 2.5
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot... 27 3.3
At3g52970.1 68416.m05839 cytochrome P450 family protein cytochro... 26 5.7
At5g45340.2 68418.m05566 cytochrome P450 family protein similar ... 26 7.6
At5g45340.1 68418.m05565 cytochrome P450 family protein similar ... 26 7.6
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 25 10.0
At3g11280.2 68416.m01372 myb family transcription factor contain... 25 10.0
At3g11280.1 68416.m01371 myb family transcription factor contain... 25 10.0
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 25 10.0
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 25 10.0
>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
identical to obtusifoliol 14-demethylase (GI:14624983)
[Arabidopsis thaliana]
Length = 488
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +1
Query: 61 ALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 231
++ A GK + +T F + DP YDP R + GR +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422
>At3g13180.1 68416.m01649 NOL1/NOP2/sun family protein /
antitermination NusB domain-containing protein low
similarity to SP|P36929 SUN protein (FMU protein)
{Escherichia coli}; contains Pfam profiles PF01189:
NOL1/NOP2/sun family, PF01029: NusB family
Length = 523
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 34 LAICLSLTVALAAETGKYTPFQYNRVYSTVSPF 132
+A LS V L+AET K +P + R T PF
Sbjct: 1 MAQLLSFRVYLSAETQKASPGSFKRTQKTRKPF 33
>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 40 ICLSLTVALAAETGKYTPFQYNRVYSTVSP 129
+CL+ TVAL + Y + +N Y T +P
Sbjct: 11 VCLASTVALVSAGDPYFYYTWNVTYGTAAP 40
>At3g52970.1 68416.m05839 cytochrome P450 family protein cytochrome
P450 76A2, eggplant, PIR:S38534
Length = 516
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 121 VSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSG 222
+ P ++KP R+++DP D + ++P SG
Sbjct: 420 IDPIMFKPERFISDPDARD-FKGQDYEFLPFGSG 452
>At5g45340.2 68418.m05566 cytochrome P450 family protein similar to
SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 446
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 37 AICLSLTVALAAETGKYTPFQYNRVYSTVSPF--VYKPGRYVADPGRYDPSR 186
A LS T A E +Y + + + + F ++ +DPG++DPSR
Sbjct: 340 ATILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHNADIFSDPGKFDPSR 391
>At5g45340.1 68418.m05565 cytochrome P450 family protein similar to
SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 463
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 37 AICLSLTVALAAETGKYTPFQYNRVYSTVSPF--VYKPGRYVADPGRYDPSR 186
A LS T A E +Y + + + + F ++ +DPG++DPSR
Sbjct: 340 ATILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHNADIFSDPGKFDPSR 391
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 202 NGQSCRGWGHNGLDQLHSGL 143
N + +GW G DQL SGL
Sbjct: 329 NNLTLKGWPLTGFDQLRSGL 348
>At3g11280.2 68416.m01372 myb family transcription factor contains
Pfam profile: PF00249 Myb-like DNA-binding domain
Length = 263
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 132 EWRNSRVNSVVLERSVLSSFGGQRHCQRQADCQKDTHXP 16
+WRN N VV + + Q++ QRQ KD P
Sbjct: 148 DWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRP 186
>At3g11280.1 68416.m01371 myb family transcription factor contains
Pfam profile: PF00249 Myb-like DNA-binding domain
Length = 263
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 132 EWRNSRVNSVVLERSVLSSFGGQRHCQRQADCQKDTHXP 16
+WRN N VV + + Q++ QRQ KD P
Sbjct: 148 DWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRP 186
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 145 GRYVADPGRYDPSRDNSGR 201
GR+V PG D S D SG+
Sbjct: 289 GRFVGSPGMADDSDDGSGK 307
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 25.4 bits (53), Expect = 10.0
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 22 MRVFLAICLSLTVALAAETGKYTPFQ--YNRVYSTVSPFVYKPGRYV 156
M LA+CL L+ LAAE +P +N ++ + K G +V
Sbjct: 1 MTNLLALCLVLSTLLAAEVWSPSPAMTTHNTAVASEGEVIVKDGHHV 47
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,562,264
Number of Sequences: 28952
Number of extensions: 86155
Number of successful extensions: 293
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 409426656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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