Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31016
(559 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 166 9e-42
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 5e-41
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 1e-40
SB_56| Best HMM Match : Actin (HMM E-Value=0) 163 1e-40
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 162 2e-40
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 5e-40
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 143 8e-35
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 54 1e-07
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 50 1e-06
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 31 0.84
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 3.4
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.4
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 166 bits (404), Expect = 9e-42
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 194
ANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 269 ANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 328
Query: 195 MWISKEEYDESGPGIVHRKCF 257
MWISK+EYDESGP IVHRKCF
Sbjct: 329 MWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 164 bits (398), Expect = 5e-41
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 194
ANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 258 ANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 317
Query: 195 MWISKEEYDESGPGIVHRKCF 257
MWISK+EYDESGP IVHRKCF
Sbjct: 318 MWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 163 bits (395), Expect = 1e-40
Identities = 74/81 (91%), Positives = 79/81 (97%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 194
ANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 296 ANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 355
Query: 195 MWISKEEYDESGPGIVHRKCF 257
MWISK+EYDESGP IVHRKCF
Sbjct: 356 MWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 163 bits (395), Expect = 1e-40
Identities = 74/81 (91%), Positives = 79/81 (97%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 194
ANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 295 ANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 354
Query: 195 MWISKEEYDESGPGIVHRKCF 257
MWISK+EYDESGP IVHRKCF
Sbjct: 355 MWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 162 bits (394), Expect = 2e-40
Identities = 74/81 (91%), Positives = 79/81 (97%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 194
ANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 296 ANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 355
Query: 195 MWISKEEYDESGPGIVHRKCF 257
MWISK+EYDESGP IVHRKCF
Sbjct: 356 MWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 161 bits (390), Expect = 5e-40
Identities = 73/81 (90%), Positives = 79/81 (97%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 194
ANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 295 ANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 354
Query: 195 MWISKEEYDESGPGIVHRKCF 257
MWISK+EYDESGP IVHRKCF
Sbjct: 355 MWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 143 bits (347), Expect = 8e-35
Identities = 64/81 (79%), Positives = 74/81 (91%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 194
+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 69 SNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQ 128
Query: 195 MWISKEEYDESGPGIVHRKCF 257
MWI+KEEY E GP IVHRKCF
Sbjct: 129 MWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Frame = +3
Query: 18 NTVMSGGTTMYPGIADRMQKEITA----------------LAPSTIKIKIIAPPERKYSV 149
N V+SGG+TM+ R+Q++I + P I+ ++I+ ++Y+V
Sbjct: 245 NIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAV 304
Query: 150 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 257
W GGS+LAS F + +K +YDE GP I F
Sbjct: 305 WFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/57 (35%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = +3
Query: 18 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWIGGSILASL 179
+ +++GG T+ G +R+ +E+ + P ++++K+I+ E++++ WIGGSILASL
Sbjct: 174 SVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 230
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Frame = +3
Query: 18 NTVMSGGTTMYPGIADRMQKEITALAPST-------IK-IKIIAPP-ERKYSVWIGGSIL 170
N V+ GGT M PG R+ +EI L S IK +K+ PP + W+GG+I
Sbjct: 80 NIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGGAIF 139
Query: 171 ASLSTFQQMWISKEEYDE 224
SL ++E Y +
Sbjct: 140 GSLEVLADRSTTRERYQQ 157
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 30.7 bits (66), Expect = 0.84
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 3 FGTRANTVMSGGTTMYPGIADRMQKEITALAP 98
FG R N ++GG TMY R+++E+ A+ P
Sbjct: 128 FG-RCNVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 166 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPDMTVLALVPN 2
+DPP+ +Y L+GG ++ ++ FCI G++V PP+ ++P+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPECNSAIVLPD 810
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 5 RHEGQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEV 142
R +GQ R + RY RQ E AL+ +++D R + EV
Sbjct: 122 RDDGQLRETKLQQENTRYERQMREMREEMSALEKREEDMRKRKSEV 167
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 56 YRRQDAEGDHRPRALDHQDQDHRSPREE 139
+RRQDA DHR + DH QD PR++
Sbjct: 664 HRRQDA--DHRRQDADHHRQDVVHPRQD 689
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 134
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 15 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 134
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,928,241
Number of Sequences: 59808
Number of extensions: 320170
Number of successful extensions: 1065
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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